univieCUBE / gepardLinks
Genome Pair Rapid Dotter
☆67Updated 3 years ago
Alternatives and similar repositories for gepard
Users that are interested in gepard are comparing it to the libraries listed below
Sorting:
- ☆63Updated 2 weeks ago
- ☆44Updated 8 years ago
- finshingTool☆54Updated 8 years ago
- MarginPolish: Graph based assembly polishing☆46Updated 4 years ago
- Miscellaneous scripts for applications of PacBio systems☆27Updated 3 years ago
- ☆77Updated 5 years ago
- Mumemto: multi-MUM and MEM finding across pangenomes☆104Updated 3 weeks ago
- Call select base modifications in PacBio HiFi reads☆10Updated 6 months ago
- Graphical interactive tool for the visualization of sequence graphs in GFA format.☆70Updated 6 years ago
- Scripts to estimate genome size and coverage from kmer distribution generated by jellyfish☆57Updated 2 years ago
- A tool for evaluate long-read de novo assembly results☆48Updated 11 months ago
- Evaluate variant calls and its combination with k-mer multiplicity☆67Updated 2 years ago
- Show pangenome graphs in an easy way☆56Updated this week
- Read, manipulate and visualize 'Pairwise mApping Format' data in R☆74Updated 4 years ago
- A tool for the recovery of unassembled telomeres from soft-clipped read alignments.☆41Updated 4 months ago
- Python wrappers for programs that search for transposable elements☆19Updated 9 years ago
- Compute N50/NG50 and auN/auNG☆32Updated last year
- Tool for assessing/improving assembly quality in extra-long tandem repeats☆46Updated 4 years ago
- In-depth characterization and annotation of differences between two sets of DNA sequences☆61Updated 5 years ago
- ☆81Updated 5 months ago
- Improve the quality of a denovo assembly by scaffolding and gap filling☆56Updated 4 years ago
- Conditional Reciprocal Best Blast☆41Updated 8 years ago
- TSEBRA: Transcript Selector for BRAKER☆47Updated 8 months ago
- HyPo: Super Fast & Accurate Polisher for Long Read Genome Assemblies☆64Updated 5 years ago
- Extract metagenome-assembled genomes (MAGs) from metagenomic data using Hi-C.☆24Updated last month
- k-mer learning materials☆73Updated 5 months ago
- TGS scaffolding☆46Updated 3 years ago
- tools for assessing the accuracy of genome assemblies☆34Updated last year
- ☆32Updated 4 years ago
- Code for phasing SVs with SNPs☆52Updated 5 years ago