mararie / lionessRView external linksLinks
Single sample network reconstruction in R
☆24Apr 6, 2020Updated 5 years ago
Alternatives and similar repositories for lionessR
Users that are interested in lionessR are comparing it to the libraries listed below
Sorting:
- Marker gene profile estimation method used in NeuroExpresso manuscript☆14Jul 11, 2019Updated 6 years ago
- Calculate AUC based on GWAS summary statistics only☆10Jun 29, 2018Updated 7 years ago
- HGNC Comparison of Orthology Predictions (HCOP)☆14Mar 22, 2018Updated 7 years ago
- A collection of open source bioinformatics tools developed and used by Addgene.☆11Sep 9, 2025Updated 5 months ago
- Code for 'Teaching with Interactive Data Visualization' site☆23May 6, 2015Updated 10 years ago
- ☆16Oct 16, 2017Updated 8 years ago
- Tutorial for working with cloud infrastructure and AWS from R☆20Jul 26, 2017Updated 8 years ago
- Community-maintained list of resources that the CI4CC organization and the larger cancer informatics community have found useful or are d…☆22Sep 24, 2018Updated 7 years ago
- ☆22May 6, 2022Updated 3 years ago
- Optimizing Cancer Mutation Signatures Jointly with Sampling Likelihood☆10Aug 22, 2022Updated 3 years ago
- Pipeline for generating RNAseq-based cancer patient reports☆11Feb 4, 2026Updated last week
- ☆11Jun 18, 2024Updated last year
- ☆11Sep 5, 2018Updated 7 years ago
- COmplex Network Description Of Regulators, an R package for bipartite network analysis☆12Jul 5, 2019Updated 6 years ago
- Identifying, understanding, and correcting technical biases on the sex chromosomes in next-generation sequencing data☆23Apr 11, 2019Updated 6 years ago
- ☆22Nov 11, 2019Updated 6 years ago
- A python package for learning mutational signatures and their multidimensional genomic properties☆15Sep 1, 2020Updated 5 years ago
- ☆12Aug 14, 2020Updated 5 years ago
- Multivariate adaptive shrinkage methods used for analysis GTEx data in Urbut et al (2017).☆12Sep 25, 2017Updated 8 years ago
- Shiny app for visualization, exploration of mouse brain single cell gene expression☆11Oct 31, 2018Updated 7 years ago
- ☆11Jun 29, 2021Updated 4 years ago
- scRNA-seq workshop in Oxford on 9 September 2016☆11Sep 7, 2016Updated 9 years ago
- Scripts and Snakemake pipeline used in the EMBL-ABR webinar☆13Jul 24, 2019Updated 6 years ago
- Scripts to run and benchmark scRNA-seq cell cluster labeling methods☆48May 23, 2020Updated 5 years ago
- Opossum is a tool to pre-process RNA-seq reads prior to variant calling.☆28Jul 7, 2018Updated 7 years ago
- genetic correlation between phenotypes in the UK biobank☆13Feb 22, 2024Updated last year
- R htmlwidget package for ideogram.js☆15Oct 26, 2022Updated 3 years ago
- Source code for the GWAS Diversity Monitor☆16Sep 1, 2025Updated 5 months ago
- ☆13Dec 19, 2018Updated 7 years ago
- ☆13Mar 20, 2021Updated 4 years ago
- ☆11Dec 8, 2022Updated 3 years ago
- materials and website for the 2016 kallisto sleuth workshop☆11Nov 7, 2016Updated 9 years ago
- Structured Linear Mixed Model is a method to test for loci that interact with multiple environments.☆14Sep 16, 2020Updated 5 years ago
- Visualisation and prioritisation of genomic variants from human exome sequencing projects☆13Apr 23, 2019Updated 6 years ago
- Super high performance interactive heatmap software☆31Nov 19, 2018Updated 7 years ago
- Mixed models @lme4 + custom covariances + parameter constraints☆53Jan 7, 2021Updated 5 years ago
- Annotation and Prediction of Oncogenic Gene Fusions in RNAseq☆12Feb 20, 2016Updated 9 years ago
- SODAR: System for Omics Data Access and Retrieval☆19Updated this week
- Machine learning use cases for teaching☆13Jul 12, 2017Updated 8 years ago