Yale-EEB723 / syllabusLinks
☆22Updated 6 years ago
Alternatives and similar repositories for syllabus
Users that are interested in syllabus are comparing it to the libraries listed below
Sorting:
- Generates an NCBI .tbl file of annotations on a genome.☆68Updated 7 years ago
- This repository provides source code for several pipelines dedicated to the alignment of nucleotide coding sequences that are based on MA…☆34Updated last year
- Detecting natural selection from population-based genetic data☆27Updated 6 years ago
- Genome Annotation Without Nightmares☆45Updated 5 months ago
- Automated de novo assembly of whole chloroplast genomes.☆46Updated 9 months ago
- Read, manipulate and visualize 'Pairwise mApping Format' data in R☆74Updated 4 years ago
- Interim data for the Darwin Tree of Life Project☆33Updated 5 years ago
- Tutorial about R package PopGenome☆41Updated 6 years ago
- Synteny Imager☆63Updated 10 months ago
- Genome-wide de novo genotyping with 2bRAD☆23Updated last month
- Alignment-based retrieval and concatenation of phylogenetic markers from whole genome sequence (WGS) data☆36Updated last year
- A statistical framework for ploidy estimation using NGS short-read data☆59Updated 7 years ago
- A program for the Maximum-likelihood analysis of population genomic data.☆28Updated 4 years ago
- Whole-genome bioinformatic pipeline for pooled or individual-based NGS data using bash and R☆21Updated 3 years ago
- Bioinformatic pipeline for processing Sequence Capture data for Phylogenetics☆21Updated 2 years ago
- Files for the the Physalia course on Population genomic inference from low-coverage whole-genome sequencing data, Oct 10-13, 2022☆59Updated 8 months ago
- Repository for speciation genomics website☆25Updated 11 months ago
- R Package to Estimate Variable Recombination Rates using Population Genetic Data☆42Updated 5 years ago
- SambaR: Snp datA Management and Basic Analyses in R☆28Updated last month
- Fast and pretty dotplots for whole genomes assemblies using minimap and R/ggplot2☆74Updated 8 years ago
- A tool to identify and annotate homoplasies on a phylogeny and sequence alignment☆20Updated 4 years ago
- Pipelines and tools for the processing of ancient and modern HTS data.☆47Updated 3 weeks ago
- microhaplotype visualizer and analyzer☆19Updated 4 years ago
- These are scripts that I use frequently in genome annotation projects. Some of them have evolved awkwardly so the code is difficult to fo…☆16Updated 7 years ago
- Rank-based Gene Ontology analysis of gene expression data☆42Updated 2 years ago
- simple examples of using supervised machine learning for population genetics inference☆38Updated 7 years ago
- A massively parallel tool for model selection and tree inference on thousands of genes☆49Updated last year
- EnTAP is moving to GitLab for future changes https://gitlab.com/PlantGenomicsLab/EnTAP☆40Updated 5 months ago
- Tutorials on phylogenomic analyses for the ForBio Phylogenomics course☆37Updated last year
- Population genetics analyses from NGS data☆25Updated 4 years ago