☆94Sep 7, 2022Updated 4 years ago
Alternatives and similar repositories for GeoPPI
Users that are interested in GeoPPI are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- open source repository☆149Nov 30, 2023Updated 2 years ago
- ☆23Jun 24, 2022Updated 4 years ago
- Deep learning models and structure realization scripts for the DeepAb antibody structure prediction method.☆174Nov 30, 2022Updated 3 years ago
- Fast, accurate antibody structure prediction from deep learning on massive set of natural antibodies☆439Sep 9, 2026Updated last month
- ☆77Sep 2, 2020Updated 6 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Efficient evolution from protein language models☆229Aug 26, 2023Updated 3 years ago
- ☆110Apr 1, 2023Updated 3 years ago
- ✌🏻 Antigen-Specific Antibody Design and Optimization with Diffusion-Based Generative Models for Protein Structures (NeurIPS 2022)☆370Jun 29, 2023Updated 3 years ago
- ☆258May 22, 2023Updated 3 years ago
- AbLang: A language model for antibodies☆173Oct 30, 2026Updated last week
- ☆23Jul 4, 2021Updated 5 years ago
- EvoEF + evolutionary profile for ddG_bind prediction☆15Oct 17, 2025Updated last year
- ☆121Dec 7, 2022Updated 3 years ago
- Codebase for our preprint using trRosetta to design proteins with discontinuous functional sites, found here: https://www.biorxiv.org/con …☆16Oct 27, 2021Updated 5 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Graphinity: Equivariant Graph Neural Network Architecture for Predicting Change in Antibody-Antigen Binding Affinity☆68Jul 9, 2025Updated last year
- ☆19Oct 4, 2022Updated 4 years ago
- ☆133Sep 5, 2022Updated 4 years ago
- Note that current version does not include search of very large metagenome data. For some proteins, metagenome data is important. We will…☆100Jan 26, 2022Updated 4 years ago
- Physical energy function for protein sequence design☆46May 6, 2023Updated 3 years ago
- ☆12May 16, 2020Updated 6 years ago
- Pretrainable geometric graph neural network for antibody affinity maturation☆86Mar 18, 2025Updated last year
- Official repository for the paper "Tranception: Protein Fitness Prediction with Autoregressive Transformers and Inference-time Retrieval"☆170Aug 24, 2023Updated 3 years ago
- ☆161Jul 28, 2026Updated 3 months ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- MaSIF- Molecular surface interaction fingerprints. Geometric deep learning to decipher patterns in molecular surfaces.☆788Jun 19, 2024Updated 2 years ago
- Building more accurate protein structures from backbone torsion angles☆16Mar 21, 2025Updated last year
- Masif seed paper repository☆174Sep 22, 2025Updated last year
- ☆37Jan 15, 2023Updated 3 years ago
- This repo contains the codes for our paper Conditional Antibody Design as 3D Equivariant Graph Translation.☆112Apr 7, 2023Updated 3 years ago
- ☆18Mar 13, 2024Updated 2 years ago
- This is the official repository of paper - GeoAB: Towards Realistic Antibody Design and Reliable Affinity Maturation (ICML2024)☆46Jun 17, 2024Updated 2 years ago
- This repo contains the codes for our paper "End-to-End Full-Atom Antibody Design"☆135Feb 26, 2025Updated last year
- Using Rotamer Interaction Fields from RIFGen/Dock in python☆17May 2, 2021Updated 5 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Code for ColabDock paper☆159May 1, 2025Updated last year
- Protein hallucination and inpainting with RoseTTAFold☆284Mar 30, 2023Updated 3 years ago
- Antibody Binding Mutational Database☆44Apr 10, 2019Updated 7 years ago
- The code for NeurIPS 2023 paper DSR☆14Oct 8, 2023Updated 3 years ago
- Rifdock Library for Conformational Search☆178May 16, 2024Updated 2 years ago
- Making Protein Design accessible to all via Google Colab!☆947Oct 14, 2026Updated 3 weeks ago
- Antibody-Antigen Docking and Affinity Benchmark☆78Nov 17, 2020Updated 5 years ago