snerligit / mhc-pep-threader
☆12Updated 4 years ago
Related projects ⓘ
Alternatives and complementary repositories for mhc-pep-threader
- ☆14Updated 8 months ago
- ☆9Updated last year
- Repository of all EJP lab computational projects☆10Updated 3 weeks ago
- ☆15Updated 5 months ago
- ☆24Updated 3 months ago
- Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations☆25Updated 2 months ago
- This repository contains code for the paper: "Tertiary motifs as building blocks for the design of protein-binding peptides"☆15Updated 10 months ago
- Some scripts that I keep using over and over.☆18Updated 8 months ago
- Using Rotamer Interaction Fields from RIFGen/Dock in python☆16Updated 3 years ago
- a fast and accurate physical energy function extended from EvoEF for protein sequence design☆25Updated last year
- Epitope Prediction Pipeline and analysis tools built around AlphaFold 2☆12Updated 6 months ago
- An antibody-specific language model focusing on NGL prediction☆21Updated 3 months ago
- Interface-aware molecular generative framework for protein-protein interaction modulators☆11Updated this week
- Rosetta FunFolDes – a general framework for the computational design of functional proteins.☆18Updated 5 years ago
- Geometry-aware protein binding site predictor☆16Updated 2 months ago
- ☆10Updated 4 years ago
- Tutorial files☆11Updated 3 months ago
- Scoring methods for predicting the DDG upon protein mutation☆11Updated last year
- ☆14Updated 7 months ago
- Codebase for our preprint using trRosetta to design proteins with discontinuous functional sites, found here: https://www.biorxiv.org/con…☆16Updated 3 years ago
- Fast deep learning methods for large-scale protein-protein interaction screening☆24Updated last month
- ☆11Updated 5 months ago
- Computationally Restoring the Potency of a Clinical Antibody☆16Updated 8 months ago
- CARE: a Benchmark Suite for the Classification and Retrieval of Enzymes☆24Updated 3 weeks ago
- ☆8Updated last year
- ☆18Updated 6 months ago
- De novo design of small molecule binding sites into proteins☆13Updated 3 years ago
- ☆19Updated 2 years ago
- ☆45Updated 3 weeks ago
- Extract ligand binding sites from PDB. Match the binding sites to de novo scaffolds.☆11Updated 3 years ago