Alternatives and similar repositories for mhc-pep-threader

Users that are interested in mhc-pep-threader are comparing it to the libraries listed below

• swanss / peptide_design
  This repository contains code for the paper: "Tertiary motifs as building blocks for the design of protein-binding peptides"
  ☆17Updated last year
• strauchlab / scaffold_design
  ☆18Updated last year
• matteoferla / pyrosetta-help
  Some scripts that I keep using over and over.
  ☆20Updated 2 months ago
• Furman-Lab / PatchMAN
  ☆26Updated last month
• LPDI-EPFL / FunFolDesData
  Rosetta FunFolDes – a general framework for the computational design of functional proteins.
  ☆21Updated 6 years ago
• Andre-lab / evodock
  A Memetic Algorithm boosts accuracy and speed of all-atom protein-protein docking
  ☆29Updated 2 months ago
• csi-greifflab / developability_profiling
  ☆25Updated 3 weeks ago
• tommyhuangthu / EvoEF2
  Physical energy function for protein sequence design
  ☆33Updated 2 years ago
• dtischer / trdesign-motif
  Codebase for our preprint using trRosetta to design proteins with discontinuous functional sites, found here: https://www.biorxiv.org/con…
  ☆16Updated 3 years ago
• MSDLLCpapers / AbMelt
  ☆14Updated last year
• strauchlab / iNNterfaceDesign
  ☆20Updated 2 years ago
• 3BioCompBio / pyScoMotif
  Python tool for the discovery of similar 3D structural motifs across protein structures.
  ☆30Updated last year
• psalveso / pyRIF
  Using Rotamer Interaction Fields from RIFGen/Dock in python
  ☆16Updated 4 years ago
• Merck / AbLEF
  Antibody Langauge Ensemble Fusion - fuses antibody structural ensemble and language representation for property prediction
  ☆13Updated last year
• mjendrusch / salad
  protein structure generation with sparse all-atom denoising models
  ☆36Updated last month
• CongLabCode / RoseTTAFold2-PPI
  Fast deep learning methods for large-scale protein-protein interaction screening
  ☆52Updated last month
• amyguo1997 / dynamic_protein_design
  Code for deep learning guided design of dynamic proteins
  ☆29Updated last year
• LPDI-EPFL / trivalent_cocktail
  ☆11Updated 5 years ago
• RosettaCommons / AF2_peptide_hallucination
  Code for designing binders to flexible peptides with AlphaFold2 Hallucination
  ☆28Updated last year
• NRGlab / Surfaces
  ☆15Updated 2 weeks ago
• lehner-lab / domainome
  ☆15Updated 9 months ago
• cl666666 / GVP-MSA
  ☆13Updated 2 years ago
• meilerlab / probabilities_design
  ☆15Updated 5 months ago
• PDBeurope / protein-cluster-conformers
  Clusters protein chains based on CA distance difference
  ☆16Updated 7 months ago
• vendruscolo-lab / AlphaFold-IDP
  This repository provides with custom code and analysis scripts to generate structural ensembles of intrinsically disordered proteins by u…
  ☆19Updated 9 months ago
• beckham-lab / EpHod
  Machine learning prediction of enzyme optimum pH
  ☆45Updated 4 months ago
• swanss / FragFold
  Fragment binding prediction with ColabFold
  ☆37Updated 5 months ago
• LLNL / CRPCA
  Computationally Restoring the Potency of a Clinical Antibody
  ☆18Updated last year
• Lailabcode / DeepViscosity
  DeepViscosity is a deep learning ANN model developed to predict high concentrated monoclonal antibody viscosity classes (Low <= 20cps, Hi…
  ☆16Updated last month
• bwicky / SAPP_DMX
  ☆21Updated last month