yjcyxky / antibody-dl
A Collection of Platform, Tools, and Resources for Antibody Engineering
☆14Updated last year
Alternatives and similar repositories for antibody-dl:
Users that are interested in antibody-dl are comparing it to the libraries listed below
- Tools for annotation, processing and ML for antibody sequences☆24Updated 2 weeks ago
- Machine learning-driven antibody design☆54Updated last year
- Predict the structure of immune receptor proteins☆48Updated 2 months ago
- The Patent and Literature Antibody Database (PLAbDab): an evolving reference set of functionally diverse, literature-annotated antibody s…☆23Updated 6 months ago
- An antibody-specific language model focusing on NGL prediction☆23Updated 4 months ago
- ColabFold protocol☆48Updated 3 months ago
- Inference code for Bio-Inspired Antibody Language Model☆22Updated 4 months ago
- Fast deep learning methods for large-scale protein-protein interaction screening☆29Updated 3 months ago
- ☆16Updated last month
- ☆27Updated last week
- ☆25Updated 5 years ago
- Results and data from the pilot round of the Protein Engineering Tournament☆26Updated last month
- Prediction of binding residues for metal ions, nucleic acids, and small molecules.☆32Updated last month
- ☆23Updated 3 years ago
- Computational tools for extremely low-cost, massively parallel amplicon-based sequencing of every variant in protein mutant libraries.☆32Updated 2 years ago
- Code and data to reproduce analyses in Biswas et al. (2020) "Low-N protein engineering with data-efficient deep learning".☆56Updated 3 years ago
- Adapting protein language models for structure-conditioned design☆34Updated 5 months ago
- Graph Network for protein-protein interface including language model features☆28Updated 9 months ago
- Python package to manage protein structures and their annotations☆41Updated 10 months ago
- a collection of colabs useful for molecular biology☆30Updated 10 months ago
- ☆9Updated last year
- Ultra-fast in-silico structure mutation☆32Updated 2 years ago
- ☆28Updated 8 months ago
- ☆60Updated last month
- PyTorch implementation of Parapred (Liberis et al., 2018) with Paratyping (Richardson et al., 2021)☆18Updated last year
- Tool for rapid clustering of antibody models by the structure of their CDRs.☆19Updated 2 months ago
- ☆19Updated 2 months ago
- ☆18Updated 2 weeks ago
- Template-based protein design with Raygun☆54Updated 2 months ago
- Fast AlphaFold-Multimer based pipeline for Protein-Protein Interaction (PPI) screening☆31Updated 3 months ago