LPDI-EPFL / Bottom-up-de-novo-design
☆14Updated 4 years ago
Alternatives and similar repositories for Bottom-up-de-novo-design:
Users that are interested in Bottom-up-de-novo-design are comparing it to the libraries listed below
- Parametric Building of de novo Functional Topologies☆44Updated 3 years ago
- A bundle of deep-learning packages for biomolecular structure prediction and design contributed to the Rosetta Commons☆35Updated 2 years ago
- Rosetta FunFolDes – a general framework for the computational design of functional proteins.☆19Updated 6 years ago
- a fast and accurate physical energy function extended from EvoEF for protein sequence design☆29Updated last year
- Code used in the manuscript for De Novo Design of Bioactive Protein Switches☆16Updated 5 years ago
- A Memetic Algorithm boosts accuracy and speed of all-atom protein-protein docking☆27Updated last year
- ☆19Updated 2 years ago
- MEGADOCK on Google Colaboratory☆16Updated last year
- ☆28Updated 11 months ago
- Identifying peptide-receptor interactions using AlphaFold-Multimer☆26Updated last year
- A DDG benchmark capture containing the benchmark dataset and benchmarked protocol captures.☆17Updated 9 years ago
- Python Toolbox For Rosetta Silent Files Processing☆16Updated 5 years ago
- ☆34Updated 3 years ago
- Structural space exploration of AlphaFold DB☆12Updated 3 years ago
- Using Rotamer Interaction Fields from RIFGen/Dock in python☆16Updated 3 years ago
- DE-STRESS is a model evaluation pipeline that aims to make protein design more reliable and accessible.☆24Updated last month
- De novo design of small molecule binding sites into proteins☆12Updated 4 years ago
- Protein-protein binding affinity benchmark☆13Updated 2 months ago
- ☆14Updated 2 months ago
- ☆17Updated last year
- development repository for PyInteraph2☆22Updated last month
- An open-source library for the analysis of protein interactions.☆29Updated 3 years ago
- Some scripts that I keep using over and over.☆18Updated 3 months ago
- ☆35Updated last year
- dMaSIF implementation for google colab☆32Updated 2 years ago
- ☆39Updated last year
- Codebase for our preprint using trRosetta to design proteins with discontinuous functional sites, found here: https://www.biorxiv.org/con…☆16Updated 3 years ago
- ☆13Updated 3 years ago
- ☆10Updated 3 years ago
- A Collection of Platform, Tools, and Resources for Antibody Engineering☆15Updated last year