barricklab / mutant-protein-stabilityLinks
Modeling the effects of mutations in proteins using PyRosetta
☆27Updated 7 years ago
Alternatives and similar repositories for mutant-protein-stability
Users that are interested in mutant-protein-stability are comparing it to the libraries listed below
Sorting:
- Some scripts that I keep using over and over.☆21Updated 5 months ago
- Physical energy function for protein sequence design☆34Updated 2 years ago
- ☆27Updated 2 weeks ago
- Codebase for our preprint using trRosetta to design proteins with discontinuous functional sites, found here: https://www.biorxiv.org/con…☆16Updated 4 years ago
- Enzyme datasets used to benchmark enzyme-substrate promiscuity models☆40Updated 4 years ago
- An accurate and efficient protein sequence design approach☆25Updated 9 months ago
- A bundle of deep-learning packages for biomolecular structure prediction and design contributed to the Rosetta Commons☆36Updated 3 years ago
- DDGScan: an integrated parallel workflow for the in silico point mutation scan of protein☆49Updated last year
- PyPEF – Pythonic Protein Engineering Framework☆24Updated 3 months ago
- Machine learning prediction of enzyme optimum pH☆48Updated 8 months ago
- ☆36Updated 2 years ago
- Scores for Hydrophobicity and Charges based on SASAs☆40Updated 6 months ago
- PyDock Tutorial☆35Updated 7 years ago
- Fast and accurate protein domain segmentation using Invariant Point Attention☆43Updated 7 months ago
- DE-STRESS is a model evaluation pipeline that aims to make protein design more reliable and accessible.☆29Updated 9 months ago
- Controlling the usage of hydrophobic residues on AfDesign for binder peptide design with AlphaFold hallucination protocol☆33Updated 2 years ago
- Active Learning-Assisted Directed Evolution for Protein Engineering☆76Updated 2 months ago
- PepFun 2.0: improved protocols for the analysis of natural and modified peptides☆26Updated 2 years ago
- ☆41Updated last year
- Making Protein folding accessible to all!☆25Updated last year
- ☆21Updated 2 years ago
- Extension of ThermoMPNN for double mutant predictions☆49Updated 2 months ago
- Kuhlman Lab Installation of AlphaFold3☆37Updated 3 months ago
- Parametric Building of de novo Functional Topologies☆44Updated 3 years ago
- The official repository for TherML - a machine learning approach to predict scFv and antibody thermostability☆14Updated 2 years ago
- Bioinformatics and Cheminformatics protocols for peptide analysis☆44Updated 3 years ago
- ☆29Updated 5 years ago
- ☆20Updated 3 years ago
- Universal framework for physically based computational protein design☆35Updated 2 years ago
- ☆23Updated 4 years ago