harryjubb / pdbtoolsLinks
Tool(s) for cleaning, munging and analysing PDB files for structural bioinformatics analysis.
☆14Updated 6 years ago
Alternatives and similar repositories for pdbtools
Users that are interested in pdbtools are comparing it to the libraries listed below
Sorting:
- PCA and normal mode analysis of proteins☆20Updated last year
- Protein common interface databases☆10Updated 6 years ago
- Ligand binding site prediction and virtual screening☆12Updated 7 years ago
- protein docking using a density-based descriptor for atoms charge and dynamics☆14Updated 3 years ago
- ☆11Updated 5 years ago
- ☆13Updated 8 years ago
- This repository provides C++17 command-line tools for analyzing molecular structures by computing volumes, channels, cavities, and tunnel…☆12Updated last week
- ☆30Updated 8 months ago
- Protein-protein binding affinity benchmark☆16Updated 11 months ago
- Protein-Ligand Interaction Fingerprints☆21Updated 5 years ago
- chemmodlab: A Cheminformatics Modeling Laboratory for Fitting and Assessing Machine Learning Models☆17Updated 2 months ago
- A bash script for an automated Rosetta Abinitio folding simulation on an HPC☆11Updated 5 years ago
- ☆12Updated 6 years ago
- Collected scripts for Pymol☆10Updated 10 years ago
- Python script that creates 2D protein-ligand interaction images☆14Updated 7 years ago
- A unified and modular interface to homology modelling software☆11Updated 2 years ago
- Computational Analysis of Novel Drug Opportunities☆40Updated last month
- PyMOL Plugin for displaying polar contacts☆18Updated 6 years ago
- Analysis and design of protein-protein or protein-peptide interactions based on atlas database.☆15Updated 3 years ago
- Source code for the BUDE Alanine Scan web application.☆12Updated 8 months ago
- Compare molecular structures after energy minimization in various force fields.☆10Updated 5 years ago
- Fast and versatile biomolecular structure PDB file parser using SQL queries☆24Updated 2 years ago
- A collection of molecular modelling tools for UCSF Chimera☆17Updated 6 years ago
- ☆15Updated 7 years ago
- EvoEF + evolutionary profile for ddG_bind prediction☆14Updated 3 months ago
- Peptide Virtual Screening Pipeline☆12Updated 6 years ago
- 🔍 Fit3D - An application for template-based detection of small structural motifs in protein structures and macromolecular structure data…☆11Updated 7 years ago
- A package for MD, Docking and Machine learning drug discovery pipeline☆44Updated 5 years ago
- Structural space exploration of AlphaFold DB☆12Updated 4 years ago
- An open-source library for the analysis of protein interactions.☆33Updated 4 years ago