tommyhuangthu / SAAINTView external linksLinks
structural antibody parser and database
☆16Jan 29, 2026Updated 2 weeks ago
Alternatives and similar repositories for SAAINT
Users that are interested in SAAINT are comparing it to the libraries listed below
Sorting:
- Integrative protein sequence design with evolutionary multiobjective optimization.☆12Jul 16, 2024Updated last year
- OPUS-Rota4: A Gradient-Based Protein Side-Chain Modeling Framework Assisted by Deep Learning-Based Predictors☆10Apr 14, 2022Updated 3 years ago
- AlphaBind code + model accompanying pre-print☆89Jul 24, 2025Updated 6 months ago
- ☆15Feb 18, 2025Updated 11 months ago
- Protein Origami via Genetic Fusions☆17Sep 19, 2022Updated 3 years ago
- ☆17Mar 26, 2024Updated last year
- Pretrained METL models with minimal dependencies☆16Sep 18, 2025Updated 4 months ago
- ☆27Aug 8, 2025Updated 6 months ago
- ☆17Feb 5, 2026Updated last week
- ☆19Jan 15, 2026Updated last month
- Versatile human antibody sequence design☆21May 27, 2025Updated 8 months ago
- An antibody-specific language model focusing on NGL prediction☆25Mar 8, 2025Updated 11 months ago
- Data repository for "Fine-tuning protein language models boosts predictions across diverse tasks"☆56Nov 5, 2025Updated 3 months ago
- ☆95Dec 31, 2025Updated last month
- ☆53Jun 25, 2025Updated 7 months ago
- mmCIF-based extension dictionary for computed structure models☆23Feb 5, 2026Updated last week
- Dataset with quantitative binding scores of scFv-format antibodies against SARS-CoV-2 target peptide☆25Mar 30, 2023Updated 2 years ago
- ☆23Jul 4, 2021Updated 4 years ago
- Code for humanization of antibody and nanobody☆74Aug 28, 2025Updated 5 months ago
- random colab notebooks for biology☆26Aug 23, 2025Updated 5 months ago
- Official repository of PXDesign☆164Dec 31, 2025Updated last month
- ☆61Apr 9, 2024Updated last year
- Fold Conditioned protein design pipeline based on AF2Multimer Hallucination☆49Dec 2, 2025Updated 2 months ago
- A Memetic Algorithm boosts accuracy and speed of all-atom protein-protein docking☆29Jul 5, 2025Updated 7 months ago
- CLIP-based model for aligning epitopes to immune receptors☆12Apr 30, 2025Updated 9 months ago
- A generalized computational framework for biomolecular modeling.☆396Jan 3, 2026Updated last month
- ☆56May 29, 2025Updated 8 months ago
- Physical energy function for protein sequence design☆37May 6, 2023Updated 2 years ago
- Contrastive learning harmonizing protein language models and natural language models☆39Jun 12, 2024Updated last year
- Pipeline for Nanopore sequencing: demultiplexing, variant calling, and quality visualization with error handling.☆10Jan 25, 2026Updated 3 weeks ago
- Collected scripts for Pymol☆10Mar 18, 2015Updated 10 years ago
- Repository for paper Nanobody–antigen interaction prediction with ensemble deep learning and prompt-based protein language models.☆43Dec 26, 2024Updated last year
- ✌🏻 Antigen-Specific Antibody Design and Optimization with Diffusion-Based Generative Models for Protein Structures (NeurIPS 2022)☆353Jun 29, 2023Updated 2 years ago
- Implementation of Protein Invariant Point Packer (PIPPack)☆35May 28, 2024Updated last year
- Fast, accurate, and deterministic protein side-chain packing☆37Feb 28, 2025Updated 11 months ago
- ☆14Oct 5, 2024Updated last year
- the analysis script for PrismNet☆10May 17, 2020Updated 5 years ago
- Code and software used to design de novo protein nanomachines. Supplementary material for "Computational design of nanoscale rotational m…☆10Mar 19, 2022Updated 3 years ago
- Python Toolbox For Rosetta Silent Files Processing☆10Aug 2, 2021Updated 4 years ago