DeepRank / iScore
iScore: an MPI supported software for ranking protein-protein docking models based on a random walk graph kernel and support vector machines
☆30Updated 2 years ago
Alternatives and similar repositories for iScore
Users that are interested in iScore are comparing it to the libraries listed below
Sorting:
- Fraction of Common Contacts Clustering Algorithm for Protein Structures☆26Updated 3 years ago
- Some Rosetta Scripts that allow for various simple tasks☆14Updated 5 years ago
- ☆13Updated 7 years ago
- Create or modify Rosetta params files (topology files) from scratch, RDKit mols or another params file☆32Updated last year
- PyDock Tutorial☆32Updated 6 years ago
- Scripts to do docking, single virtual screening, and etc.☆18Updated last year
- PyPEF – Pythonic Protein Engineering Framework☆24Updated this week
- Scripts used for Mulligan et al. (2020): Computationally-designed peptide macrocycle inhibitors of New Delhi metallo-beta-lactamase 1☆18Updated 3 years ago
- Bioinformatics and Cheminformatics protocols for peptide analysis☆41Updated 2 years ago
- An open-source library for the analysis of protein interactions.☆29Updated 3 years ago
- ☆33Updated last year
- Improving protein–ligand docking and screening accuracies by incorporating a scoring function correction term☆27Updated 5 months ago
- Repo contains source code of the SurfaceID paper☆23Updated last year
- Docking Tool Benchmarking Workflow☆24Updated 10 months ago
- A surface-based deep learning approach for the prediction of ligand binding sites on proteins☆42Updated 2 years ago
- ☆26Updated last week
- Computer aided proximal decaging as a universal strategy for temporal protein activation☆23Updated 6 years ago
- A bundle of deep-learning packages for biomolecular structure prediction and design contributed to the Rosetta Commons☆35Updated 2 years ago
- Scores for Hydrophobicity and Charges based on SASAs☆31Updated last month
- Material to run the HADDOCK antibody-antigen modelling protocol☆22Updated last year
- A Motif Hash Based Method for Matching Crosslinkers into Peptides and Proteins☆18Updated last year
- Python package to facilitate the use of popular docking software☆16Updated last year
- A Memetic Algorithm boosts accuracy and speed of all-atom protein-protein docking☆27Updated last year
- Making Protein folding accessible to all!☆22Updated last year
- A deep learning framework for predicting interactions between protein-protein interaction targets and modulators☆14Updated last year
- ☆43Updated last week
- Binding pocket optimization based on force fields and docking scoring functions☆32Updated last month
- ☆37Updated last year
- Automated construction of protein chimeras and their analysis.☆14Updated last year
- Analysis of contacts in molecular dynamics trajectories☆42Updated 5 years ago