iamysk / AFsample2
Modelling protein conformational landscape with Alphafold
☆45Updated last week
Alternatives and similar repositories for AFsample2:
Users that are interested in AFsample2 are comparing it to the libraries listed below
- Data sharing for High-throughput Prediction of Changes in Protein Conformational Distributions with Subsampled AlphaFold2☆39Updated 10 months ago
- Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.☆42Updated 3 months ago
- ☆34Updated 11 months ago
- ☆49Updated this week
- ☆43Updated 6 months ago
- scripts to find PBD structures for cancer driver proteins☆31Updated last month
- Extension of ThermoMPNN for double mutant predictions☆28Updated last week
- Deep learning framework for protein sequence design from a backbone scaffold that can leverage the molecular context including non-protei…☆38Updated 4 months ago
- Efficient manipulation of protein structures in Python☆52Updated 4 months ago
- Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations☆51Updated last month
- Binding pocket optimization based on force fields and docking scoring functions☆30Updated this week
- ☆31Updated last year
- Scores for Hydrophobicity and Charges based on SASAs☆31Updated this week
- code for SeqDance, a biophysics-informed protein language model☆22Updated 5 months ago
- ☆36Updated last year
- Generative diverse protein backbones by protein language model☆31Updated 3 months ago
- A benchmark for 3D biomolecular structure prediction models☆55Updated 3 months ago
- Code for designing binders to flexible peptides with AlphaFold2 Hallucination☆21Updated last year
- Automatic Retrieval and ClusTering of Interfaces in Complexes from 3D structural information☆28Updated 2 weeks ago
- Guiding diffusion models for antibody sequence and structure co-design with developability properties.☆32Updated 4 months ago
- ☆20Updated 4 months ago
- Implementation of Protein Invariant Point Packer (PIPPack)☆33Updated 9 months ago
- A fast sampling and analysis tool for biomolecules☆15Updated 2 months ago
- DiffDock implementation that adds support for HPC execution using Slurm and Singularity☆25Updated 5 months ago
- ☆56Updated 11 months ago
- ☆62Updated this week