Alternatives and similar repositories for Peptide_docking_with_AF2_and_RosettAfold

Users that are interested in Peptide_docking_with_AF2_and_RosettAfold are comparing it to the libraries listed below

• oxpig / kasearch
  KA-Search: Rapid and exhaustive sequence identity search of known antibodies
  ☆22Updated 10 months ago
• ohuelab / ColabFold-cycpep-dock
  Making Protein folding accessible to all!
  ☆22Updated last year
• Fleishman-Lab / CUMAb
  ☆19Updated last month
• tommyhuangthu / EvoEF2
  Physical energy function for protein sequence design
  ☆30Updated 2 years ago
• Wublab / Pythia
  Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations
  ☆59Updated 3 months ago
• RosettaCommons / Rosetta-DL
  A bundle of deep-learning packages for biomolecular structure prediction and design contributed to the Rosetta Commons
  ☆35Updated 2 years ago
• oxpig / Graphinity
  Graphinity: Equivariant Graph Neural Network Architecture for Predicting Change in Antibody-Antigen Binding Affinity
  ☆31Updated last month
• BEAM-Labs / BALM
  Inference code for Bio-Inspired Antibody Language Model
  ☆24Updated 9 months ago
• oxpig / Paragraph
  Antibody paratope prediction using Graph Neural Networks with minimal feature vectors
  ☆37Updated 2 years ago
• dohlee / antiberty-pytorch
  An unofficial re-implementation of AntiBERTy, an antibody-specific protein language model, in PyTorch.
  ☆24Updated last year
• Furman-Lab / PatchMAN
  ☆26Updated 3 weeks ago
• regeneron-mpds / propermab
  ☆23Updated 2 months ago
• oxpig / PLAbDab
  The Patent and Literature Antibody Database (PLAbDab): an evolving reference set of functionally diverse, literature-annotated antibody s…
  ☆25Updated 10 months ago
• Lailabcode / DeepSCM
  A convolutional neural network model to predict spatial charge map (SCM) score, a molecular dynamics simulation-based model to predict an…
  ☆26Updated 2 years ago
• haddocking / fcc
  Fraction of Common Contacts Clustering Algorithm for Protein Structures
  ☆26Updated 3 years ago
• Tessier-Lab-UMich / Emi_Pareto_Opt_ML
  ☆20Updated 2 years ago
• LPDI-EPFL / topobuilder
  Parametric Building of de novo Functional Topologies
  ☆44Updated 3 years ago
• oxpig / AbLang2
  An antibody-specific language model focusing on NGL prediction
  ☆27Updated 9 months ago
• tommyhuangthu / UniDesign
  Universal computational framework for protein redesign/engineering
  ☆35Updated last year
• swanss / peptide_design
  This repository contains code for the paper: "Tertiary motifs as building blocks for the design of protein-binding peptides"
  ☆17Updated last year
• Graylab / deepH3-distances-orientations
  ☆34Updated 3 years ago
• data2code / afpdb
  Efficient manipulation of protein structures in Python
  ☆54Updated 7 months ago
• dahjan / DMS_opt
  ☆68Updated 4 years ago
• rochoa85 / PepFun
  Bioinformatics and Cheminformatics protocols for peptide analysis
  ☆41Updated 2 years ago
• wendao / CAGE-Prox
  Computer aided proximal decaging as a universal strategy for temporal protein activation
  ☆23Updated last week
• Andre-lab / evodock
  A Memetic Algorithm boosts accuracy and speed of all-atom protein-protein docking
  ☆27Updated last year
• PeptoneLtd / proteinmpnn_ddg
  Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.
  ☆48Updated 2 weeks ago
• oxpig / dlab-public
  Code for the paper "DLAB - Deep learning methods for structure-basedvirtual screening of antibodies"
  ☆31Updated 2 years ago
• AmeyaHarmalkar / therML
  The official repository for TherML - a machine learning approach to predict scFv and antibody thermostability
  ☆7Updated last year
• gv20-therapeutics / antibody-in-pytorch
  Machine learning models for antibody sequences in PyTorch
  ☆39Updated 4 years ago