☆21Nov 13, 2023Updated 2 years ago
Alternatives and similar repositories for protease-gcnn-pytorch
Users that are interested in protease-gcnn-pytorch are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- The official GitHub repository for the Nature Communications paper "Computational Design of Generalist Cyclopropanases with Stereodiverge…☆13Jan 23, 2026Updated 2 months ago
- ☆11Aug 5, 2020Updated 5 years ago
- All-atom inverse protein folding through discrete flow matching (ICML2025)☆24Mar 22, 2026Updated last week
- Some scripts that I keep using over and over.☆21Jul 5, 2025Updated 8 months ago
- ☆56Feb 16, 2026Updated last month
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting with the flexibility to host WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Cloudways by DigitalOcean.
- A python implementation of pdb2oniom for QM/MM (ONIOM) calculations☆11Oct 2, 2025Updated 5 months ago
- ☆23Jul 14, 2023Updated 2 years ago
- Code for the paper titled "The Design Space of E(3)-Equivariant Atom-Centered Interatomic Potentials".☆17Nov 7, 2024Updated last year
- Protein representation and design under a single training scheme☆24Mar 3, 2026Updated 3 weeks ago
- Design a local part of a protein☆20Jan 12, 2023Updated 3 years ago
- ☆23Nov 6, 2024Updated last year
- ☆74Feb 13, 2026Updated last month
- Entropy from PDB conformational ensembles☆13Mar 28, 2024Updated 2 years ago
- Binding curve simulation and experimental data fitting for multi component protein-ligand systems☆18Nov 16, 2024Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting with the flexibility to host WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Cloudways by DigitalOcean.
- Binding pocket optimization based on force fields and docking scoring functions☆37Mar 19, 2025Updated last year
- Protocols and tools to run (automated) atomistic simulations of enzyme-ligand systems☆15Jun 15, 2019Updated 6 years ago
- Source code for the reproduction of RibbonFold paper.☆11May 10, 2025Updated 10 months ago
- ☆81Jun 29, 2025Updated 9 months ago
- Pretrained METL models with minimal dependencies☆17Sep 18, 2025Updated 6 months ago
- Active Learning-Assisted Directed Evolution for Protein Engineering☆81Oct 24, 2025Updated 5 months ago
- ☆12Dec 2, 2024Updated last year
- Robust and stable clustering of molecular dynamics simulation trajectories.☆19Sep 2, 2022Updated 3 years ago
- Building and analyzing residue interaction networks with cofactors (includes tutorial).☆18Mar 31, 2021Updated 4 years ago
- Wordpress hosting with auto-scaling on Cloudways • AdFully Managed hosting built for WordPress-powered businesses that need reliable, auto-scalable hosting. Cloudways SafeUpdates now available.
- Inference code for PoET: A generative model of protein families as sequences-of-sequences☆93Apr 24, 2024Updated last year
- Cross-protein transfer learning for variant effect prediction☆20Sep 13, 2023Updated 2 years ago
- ☆116Feb 1, 2026Updated last month
- ☆22Sep 12, 2022Updated 3 years ago
- ProteinDesign with RFdiffusion and ProteinMPNN/LigandMPNN☆23Mar 6, 2025Updated last year
- Neural networks for deep mutational scanning data☆72May 30, 2025Updated 10 months ago
- A simplified implementation of DSSP algorithm for PyTorch and NumPy☆98Jun 9, 2025Updated 9 months ago
- ☆37Jan 15, 2023Updated 3 years ago
- PCA and normal mode analysis of proteins☆20May 16, 2024Updated last year
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click and start building anything your business needs.
- A Streamdeck plugin for using Multiviewer for Formula 1☆19Mar 14, 2025Updated last year
- Julia tools for reading Crystallographic Information Framework (CIF) files and dictionaries☆15Feb 2, 2026Updated last month
- Improving protein–ligand docking and screening accuracies by incorporating a scoring function correction term☆29Dec 2, 2024Updated last year
- Adapting protein language models for structure-conditioned design☆40Aug 5, 2024Updated last year
- Dataset with quantitative binding scores of scFv-format antibodies against SARS-CoV-2 target peptide☆26Mar 30, 2023Updated 3 years ago
- A Tutorial for quasi Markov State Model(qMSM) developed by Huang Group, Dept of Chemistry at UW-Madison☆19Jun 6, 2023Updated 2 years ago
- RITA is a family of autoregressive protein models, developed by LightOn in collaboration with the OATML group at Oxford and the Debora Ma…☆99Jan 24, 2023Updated 3 years ago