Nucleus2014 / protease-gcnn-pytorchLinks
☆21Updated last year
Alternatives and similar repositories for protease-gcnn-pytorch
Users that are interested in protease-gcnn-pytorch are comparing it to the libraries listed below
Sorting:
- Some scripts that I keep using over and over.☆20Updated 3 months ago
- Physical energy function for protein sequence design☆33Updated 2 years ago
- ☆71Updated 6 months ago
- Machine learning prediction of enzyme optimum pH☆45Updated 5 months ago
- ☆27Updated last week
- Code and data used in https://doi.org/10.1101/2021.08.01.454656☆53Updated 3 years ago
- This is the public repository for the RING PyMOL plugin developed by the BioComputing UP laboratory at the University of Padua☆28Updated 2 weeks ago
- Automatic Retrieval and ClusTering of Interfaces in Complexes from 3D structural information☆32Updated this week
- Extension of ThermoMPNN for double mutant predictions☆43Updated 2 months ago
- A surface-based deep learning approach for the prediction of ligand binding sites on proteins☆44Updated 2 years ago
- Improved protein complex prediction with AlphaFold-multimer by denoising the MSA profile☆69Updated last year
- ☆28Updated 8 months ago
- ☆20Updated 3 years ago
- Enzyme datasets used to benchmark enzyme-substrate promiscuity models☆39Updated 4 years ago
- Fast and accurate protein domain segmentation using Invariant Point Attention☆41Updated 4 months ago
- Python package to atom map, correct and suggest enzymatic reactions☆39Updated last year
- Bioinformatics and Cheminformatics protocols for peptide analysis☆43Updated 2 years ago
- This repository contains code for the paper: "Tertiary motifs as building blocks for the design of protein-binding peptides"☆17Updated last year
- ☆35Updated 2 years ago
- ML toolset for creating TED: The Encyclopedia of Domains☆24Updated 4 months ago
- A Memetic Algorithm boosts accuracy and speed of all-atom protein-protein docking☆29Updated 3 months ago
- ☆29Updated 5 years ago
- Data sharing for High-throughput Prediction of Changes in Protein Conformational Distributions with Subsampled AlphaFold2☆39Updated last year
- ☆86Updated last year
- This repository provides with custom code and analysis scripts to generate structural ensembles of intrinsically disordered proteins by u…☆19Updated 9 months ago
- Python tool for the discovery of similar 3D structural motifs across protein structures.☆32Updated last year
- Kuhlman Lab Installation of AlphaFold3☆34Updated last week
- ☆41Updated last year
- RAG-ESM is a retrieval-augmented framework that allows to condition pretrained ESM2 protein language models on homologous sequences☆24Updated last month
- Efficient manipulation of protein structures in Python☆58Updated last week