Toolkit for constructing, analyzing, and visualizing data-driven ontologies
☆20Jun 21, 2019Updated 7 years ago
Alternatives and similar repositories for ddot
Users that are interested in ddot are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- CliXO algorithm re-implemented☆16Nov 9, 2021Updated 4 years ago
- Toolkit for constructing, analyzing, and visualizing data-driven ontologies☆17Feb 10, 2023Updated 3 years ago
- Annotated sequence data☆11Feb 2, 2025Updated last year
- HiView: the universal viewer for hierarchical data☆16Mar 23, 2023Updated 3 years ago
- Improving Inductive Link Prediction Using Hyper-Relational Facts☆16May 25, 2022Updated 4 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Secretory Pathway Reconstruction for Human, CHO, and Mouse☆12Aug 24, 2021Updated 5 years ago
- A “data light” TF-network mapping algorithm using only gene expression and genome sequence data.☆14May 31, 2021Updated 5 years ago
- good lecture☆15Mar 31, 2025Updated last year
- Resources for grounding protein families and complexes from text and describing their hierarchical relationships.☆18Mar 26, 2026Updated 5 months ago
- Bar chart library based on d3.js☆14Oct 31, 2016Updated 9 years ago
- ☆13Nov 28, 2018Updated 7 years ago
- ☆15Jun 4, 2014Updated 12 years ago
- qtools has helper functions to submit jobs to compute clusters (PBS on TSCC, SGE on oolite) from within Python☆21Sep 20, 2023Updated 2 years ago
- omniCLIP is a CLIP-Seq peak caller☆16Nov 14, 2020Updated 5 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆20Jun 8, 2023Updated 3 years ago
- Pandas API for multiple Gene Set Enrichment Analysis implementations in Python (GSEApy, cudaGSEA, GSEA)☆16Apr 13, 2026Updated 4 months ago
- Code sharing related to DREAM challenges☆23Feb 21, 2017Updated 9 years ago
- Gene expression viewer template☆12Aug 30, 2017Updated 9 years ago
- Flexible Integration of Data with Deep LEarning☆51Mar 24, 2023Updated 3 years ago
- deepSimDEF offers single- and multi-channel deep learning models for functional analysis of genes using Gene Ontology annotations of gene…☆13May 13, 2022Updated 4 years ago
- ☆12Feb 10, 2023Updated 3 years ago
- Beta-Poisson model for single-cell RNA-seq data analyses☆18Feb 8, 2019Updated 7 years ago
- MaxEnt code for fitting simulation outcomes/statistical models to observations☆18Jun 28, 2022Updated 4 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Raspberry pi code for controlling the rapid-deploy critical care ventilator☆15Feb 2, 2022Updated 4 years ago
- Genome-wide association studies identify genetic variations associated with a target disease or trait. Researchers and clinicians can use…☆11Apr 12, 2024Updated 2 years ago
- Exposing public genomics data via computable and searchable metadata☆13Jul 9, 2024Updated 2 years ago
- [not maintained anymore] [for study purpose] A simple PyTorch implementation for "Global Vectors for Word Representation".☆17Nov 7, 2019Updated 6 years ago
- JSON-LD parser and writer for OWL API☆17Feb 10, 2016Updated 10 years ago
- ☆21Mar 20, 2017Updated 9 years ago
- Data Integration tool utilizing network information for predictive analyses☆16May 15, 2025Updated last year
- Harmonizing pathway databases using Biological Expression Language (BEL)☆20Jul 1, 2024Updated 2 years ago
- CubeViz.js is the successor of the CubeViz and provides statistical data exploration and visualization. Its completely written in JavaScr…☆16Nov 4, 2025Updated 9 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- SNAP repository for Ringo☆15Jul 25, 2017Updated 9 years ago
- ☆10Dec 29, 2021Updated 4 years ago
- GraphQL to SPARQL bridge☆24Feb 9, 2022Updated 4 years ago
- ☆11Feb 16, 2021Updated 5 years ago
- Notebook for standardization of actvity data, nonadditivity analysis and its evaluation.☆12Mar 16, 2023Updated 3 years ago
- ☆16Mar 10, 2018Updated 8 years ago
- ☆13Sep 2, 2024Updated 2 years ago