Toolkit for constructing, analyzing, and visualizing data-driven ontologies
☆20Jun 21, 2019Updated 7 years ago
Alternatives and similar repositories for ddot
Users that are interested in ddot are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- CliXO algorithm re-implemented☆16Nov 9, 2021Updated 4 years ago
- Toolkit for constructing, analyzing, and visualizing data-driven ontologies☆17Feb 10, 2023Updated 3 years ago
- Annotated sequence data☆11Feb 2, 2025Updated last year
- HiView: the universal viewer for hierarchical data☆16Mar 23, 2023Updated 3 years ago
- Improving Inductive Link Prediction Using Hyper-Relational Facts☆16May 25, 2022Updated 4 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Secretory Pathway Reconstruction for Human, CHO, and Mouse☆12Aug 24, 2021Updated 5 years ago
- Gene Neural Network (GNN)☆12Oct 5, 2019Updated 6 years ago
- A “data light” TF-network mapping algorithm using only gene expression and genome sequence data.☆14May 31, 2021Updated 5 years ago
- good lecture☆15Mar 31, 2025Updated last year
- Goslin is the Grammar on succinct lipid nomenclature.☆14Sep 16, 2026Updated last week
- kvector is a small utility for converting motifs to kmer vectors to compare motifs of different lengths☆10May 29, 2017Updated 9 years ago
- Resources for grounding protein families and complexes from text and describing their hierarchical relationships.☆18Mar 26, 2026Updated 5 months ago
- Toolkit for discovering and aggregating data for whole-cell modeling☆16Jan 19, 2022Updated 4 years ago
- ☆13Nov 28, 2018Updated 7 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- A Python package for benchmarking pathway database with functional enrichment and classification methods☆13Mar 2, 2021Updated 5 years ago
- ☆15Jun 4, 2014Updated 12 years ago
- qtools has helper functions to submit jobs to compute clusters (PBS on TSCC, SGE on oolite) from within Python☆21Sep 20, 2023Updated 3 years ago
- ☆10May 6, 2020Updated 6 years ago
- omniCLIP is a CLIP-Seq peak caller☆16Nov 14, 2020Updated 5 years ago
- Load MovieLens dataset into Neo4j☆10Oct 25, 2018Updated 7 years ago
- ☆11Jan 2, 2023Updated 3 years ago
- ☆20Jun 8, 2023Updated 3 years ago
- Pandas API for multiple Gene Set Enrichment Analysis implementations in Python (GSEApy, cudaGSEA, GSEA)☆16Apr 13, 2026Updated 5 months ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- DEBS 2021: Graph Stream Analytics tutorial☆11Jun 29, 2021Updated 5 years ago
- Code sharing related to DREAM challenges☆23Feb 21, 2017Updated 9 years ago
- Flexible Integration of Data with Deep LEarning☆51Mar 24, 2023Updated 3 years ago
- deepSimDEF offers single- and multi-channel deep learning models for functional analysis of genes using Gene Ontology annotations of gene…☆13May 13, 2022Updated 4 years ago
- ☆12Feb 10, 2023Updated 3 years ago
- Beta-Poisson model for single-cell RNA-seq data analyses☆18Feb 8, 2019Updated 7 years ago
- resource for unix and SGE beginners☆24Feb 17, 2023Updated 3 years ago
- MaxEnt code for fitting simulation outcomes/statistical models to observations☆18Jun 28, 2022Updated 4 years ago
- Raspberry pi code for controlling the rapid-deploy critical care ventilator☆15Feb 2, 2022Updated 4 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Genome-wide association studies identify genetic variations associated with a target disease or trait. Researchers and clinicians can use…☆11Apr 12, 2024Updated 2 years ago
- Exposing public genomics data via computable and searchable metadata☆13Jul 9, 2024Updated 2 years ago
- [not maintained anymore] [for study purpose] A simple PyTorch implementation for "Global Vectors for Word Representation".☆17Nov 7, 2019Updated 6 years ago
- Pytorch implementation of a BiLSTM model for the Wikification project.☆18Mar 30, 2020Updated 6 years ago
- Gemelli is a tool box for running Robust Aitchison PCA (RPCA), Joint Robust Aitchison PCA (Joint-RPCA), TEMPoral TEnsor Decomposition (TE…☆92Jul 13, 2026Updated 2 months ago
- ☆21Mar 20, 2017Updated 9 years ago
- CubeViz.js is the successor of the CubeViz and provides statistical data exploration and visualization. Its completely written in JavaScr…☆16Nov 4, 2025Updated 10 months ago