Alternatives and similar repositories for ddot:

Users that are interested in ddot are comparing it to the libraries listed below

• obophenotype / provisional_cell_ontology
  Draft cell type definitions from data - candidates for inclusion in CL
  ☆12Updated 3 months ago
• biopragmatics / biomappings
  🗺️ Community curated and predicted equivalences and related mappings between named biological entities that are not available from prima…
  ☆53Updated last week
• opentargets / OnToma
  Map your disease and phenotype terms to the Open Targets platform ontology
  ☆21Updated 5 months ago
• ncats / stitcher
  A stitching platform for InXight
  ☆15Updated last month
• EBISPOT / OXO
  Ontology cross-reference and mapping service
  ☆18Updated this week
• bio2bel / bio2bel
  A Python framework for integrating biological databases and structured data sources in Biological Expression Language (BEL)
  ☆21Updated 3 years ago
• RTXteam / RTX
  Software repo for Team Expander Agent (Oregon State U., Institute for Systems Biology, and Penn State U.)
  ☆34Updated this week
• SmartDataAnalytics / BioKEEN
  A computational library for learning and evaluating biological knowledge graph embeddings - please see the main PyKEEN repo at https://gi…
  ☆45Updated 2 years ago
• EBISPOT / efo
  Github repo for the Experimental Factor Ontology (EFO)
  ☆57Updated last week
• evidenceontology / evidenceontology
  Evidence & Conclusion Ontology development site: Use ISSUES to request terms. See WIKI for how to request terms. See README for how to c…
  ☆50Updated this week
• krishnanlab / txt2onto
  Code for classifying unstructured text to tissue ontology terms using natural language processing and machine learning.
  ☆24Updated 8 months ago
• ga4gh / phenopacket-tools
  An app and library for building, conversion, and validation of GA4GH Phenopackets.
  ☆13Updated this week
• OntoGene / OGER
  ☆24Updated 4 years ago
• Knowledge-Graph-Hub / kg-obo
  A package to transform all OBO ontologies into KGX TSV format and OBO json, and put the transformed graph in KGhub
  ☆32Updated last year
• geneontology / helpdesk
  The Gene Ontology Helpdesk
  ☆16Updated 2 months ago
• biopragmatics / bioversions
  🪝 What's the latest version for each database?
  ☆27Updated this week
• sorgerlab / famplex
  Resources for grounding protein families and complexes from text and describing their hierarchical relationships.
  ☆18Updated 9 months ago
• biopragmatics / pyobo
  📛 A Python package for using ontologies, terminologies, and biomedical nomenclatures
  ☆65Updated last week
• biolink / ontobio
  python library for working with ontologies and ontology associations
  ☆128Updated 2 months ago
• biolink / kgx
  KGX is a Python library for exchanging Knowledge Graphs
  ☆124Updated last week
• idekerlab / hiview
  HiView: the universal viewer for hierarchical data
  ☆16Updated 2 years ago
• biocypher / clinical-knowledge-graph
  ☆18Updated 10 months ago
• biolink / biolink-model-toolkit
  A collection of useful python functions for looking up information and working with the Biolink Model
  ☆24Updated 2 months ago
• AnacletoLAB / RNA-KG
  ☆21Updated 5 months ago
• mapping-commons / mh_mapping_initiative
  Repo to organise the mouse-human phenotype mapping initiative and reconcile resources.
  ☆13Updated 3 months ago
• biothings / biothings.api
  BioThings API framework - Making high-performance API for biological annotation data
  ☆46Updated this week
• PathwayCommons / factoid
  A project to capture biological pathway data from academic papers
  ☆29Updated last month
• dhimmel / integrate
  Scripts and resources to create Hetionet v1.0, a heterogeneous network for drug repurposing
  ☆32Updated 7 years ago
• research-software-ecosystem / content
  A metadata commons to store research software metadata
  ☆41Updated this week
• geneontology / go-site
  A collection of metadata, tools, and files associated with the Gene Ontology public web presence.
  ☆46Updated last week