RNA-seq workflow: exploratory analysis and differential expression
☆80Apr 14, 2026Updated last month
Alternatives and similar repositories for rnaseqGene
Users that are interested in rnaseqGene are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆14May 23, 2016Updated 10 years ago
- mutSignatures R package - updated (dev) version - 2.1.4☆14Jan 18, 2023Updated 3 years ago
- R package for the identification of cancer-associated mutated genes using gene expression and mutation data.☆10Oct 29, 2021Updated 4 years ago
- Infer metadata for your downstream analysis straight from your RNA-Seq data☆15Nov 20, 2024Updated last year
- R package for bcbio RNA-seq analysis.☆64Sep 9, 2024Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- RNA-seq workflow: differential transcript usage☆23Aug 20, 2023Updated 2 years ago
- Interactive Differential Expression AnaLysis - DE made accessible and reproducible☆33Dec 1, 2025Updated 6 months ago
- New user☆42Oct 1, 2020Updated 5 years ago
- Meetup presentations and materials from R-Ladies Nairobi☆12Feb 6, 2024Updated 2 years ago
- e-Rum2020::A Unified Approach For Writing Automatic Reports☆20Jun 19, 2020Updated 5 years ago
- Workshop: RNA-seq analysis is easy as 1-2-3 with limma, Glimma and edgeR☆13Aug 23, 2021Updated 4 years ago
- ☆17May 15, 2024Updated 2 years ago
- A list of available and reserved slots for satRdays☆15May 19, 2021Updated 5 years ago
- DISCOVER co-occurrence and mutual exclusivity analysis for cancer genomics data☆32May 1, 2025Updated last year
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Transcript quantification import for modular pipelines☆145Apr 15, 2026Updated last month
- ☆13Mar 27, 2026Updated 2 months ago
- Invertory of TE-gene isoforms☆14Sep 18, 2023Updated 2 years ago
- Transcript quantification import with automatic metadata detection☆72Updated this week
- ☆12Apr 26, 2020Updated 6 years ago
- IsoVis enables fast and informative visualization of isoform structures and expression levels.☆14May 19, 2026Updated last week
- NOTE: This package has been renamed to sparrow and will be submitted to Bioconductor 3.14. Please use that package instead. This is kept …☆23Nov 16, 2020Updated 5 years ago
- rbioapi: User-Friendly R Interface to Biologic Web Services' API☆24Jan 26, 2026Updated 4 months ago
- eForms is the new notification standard for public procurement procedures in the EU. The TED XML Data Converter is an XSLT project to con…☆13Oct 10, 2024Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- analyze_geo_microarrays.py : Differential expression analysis of published microarrays datasets from the NCBI Gene Expression Omnibus (GE…☆11Aug 1, 2021Updated 4 years ago
- Sample Level Analysis of Pathway Alteration Enrichments☆10Jan 21, 2019Updated 7 years ago
- Molecular Signatures Database (MSigDB) in a data frame☆16Dec 3, 2018Updated 7 years ago
- R implementation of the BAGEL method to call for gene essentiality significance☆11May 1, 2018Updated 8 years ago
- An analysis of Arabidopsis RNA-seq data (hy5 mutant and wt, two replicates each; SRA accession SRX029582)☆16Jul 3, 2012Updated 13 years ago
- R Shiny application "Vaccine Designer" aiming for the construction of vaccine sequences based on multi epitope design workflow.☆11Jun 25, 2024Updated last year
- ☆42Oct 16, 2024Updated last year
- All data and notebook for my 2020 scRNA-seq analysis workshop☆18Jul 27, 2020Updated 5 years ago
- Tutorials on accessing public reference and genomic data☆32Mar 20, 2026Updated 2 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Scaffolding of genomic assemblies with RNA seq data☆15Oct 8, 2015Updated 10 years ago
- GREAT Analysis - Functional Enrichment on Genomic Regions☆98Jan 30, 2026Updated 4 months ago
- Unsupervised correction of gene independent cell responses to CRISPR-cas9☆54Apr 28, 2023Updated 3 years ago
- Chromatin ACcessibility and Transcriptomics Unifying Software☆18Oct 25, 2024Updated last year
- Visualize cancer genomes with FAIR single-cell RNA-seq data☆13Jan 5, 2023Updated 3 years ago
- ☆14Aug 9, 2016Updated 9 years ago
- 10x single cell RNA-seq data from the developing mouse retina☆16Mar 11, 2021Updated 5 years ago