Systems-Immunology-IKMB / COVIDOMICsLinks
Longitudinal multi-omics analysis identifies responses of megakaryocytes, erythroid cells and plasmablasts as hallmarks of severe COVID-19 trajectories
☆11Updated 4 years ago
Alternatives and similar repositories for COVIDOMICs
Users that are interested in COVIDOMICs are comparing it to the libraries listed below
Sorting:
- Single cell transcriptomics reveals cerebrospinal fluid immune dysregulation during healthy brain aging and cognitive impairment☆27Updated 2 years ago
- Public code repository for the Banovich Lab at the Translational Genomics Research Institute (TGen).☆46Updated last year
- Hypoxia associated molecular feature analysis☆35Updated 5 years ago
- Processing scripts for single cell DNA sequencing on the Tapestri platform☆24Updated 2 years ago
- scDataviz: single cell dataviz and downstream analyses☆63Updated 3 years ago
- R Package for Single-Cell Dataset Processing and Visualization☆63Updated 3 years ago
- Visualise correlation results and test significancies of these☆23Updated 5 years ago
- Infer Copy Number Alterations and Clonality in (Single-Cell) RNA-Seq Data☆40Updated last year
- Create stacked violin plot☆49Updated 3 years ago
- Various utility functions for Seurat single-cell analysis☆49Updated 6 months ago
- R package for specialised analysis of single cell data☆38Updated 2 years ago
- ☆44Updated 4 years ago
- Enrichment Networks for Pathway Enrichment Analysis☆53Updated 2 years ago
- An R package for drug response prediction and drug-gene association prediction.☆18Updated last month
- ☆31Updated 3 years ago
- A pipeline for scRNA-seq data analysis☆14Updated 3 months ago
- Quantify and interpret divers of variation in multilevel gene expression experiments☆64Updated last week
- Cell type pipes for R☆51Updated last year
- Toolbox with R scripts☆38Updated 6 years ago
- Code repository for the Tumor Immune Cell Atlas (TICA) project☆62Updated 3 years ago
- LDlinkR☆59Updated last year
- An R package to download and merge labeled single-cell RNA-seq data from the PanglaoDB database into a Seurat object.☆27Updated 2 years ago
- Inference of cell-cell communication from single-cell RNAseq data☆48Updated 2 months ago
- Single cell RNA analysis about paper “Caloric restriction reprograms the single-cell transcriptional landscape of Rattus norvegicus aging…☆29Updated 5 years ago
- ☆55Updated 4 years ago
- an integrative analysis tool for analysing large-scale single cell RNA-sequencing data☆33Updated last year
- ☆63Updated 4 years ago
- Tidy R query API for the harmonised and curated CELLxGENE single-cell atlas.☆92Updated 6 months ago
- simpler single cell RNAseq data clustering☆40Updated 4 months ago
- Framework for clustering, phenotyping, pseudotiming and inferring gene regulatory networks from single cell data☆104Updated 2 years ago