sunericd / dynamicvizLinks
☆61Updated last year
Alternatives and similar repositories for dynamicviz
Users that are interested in dynamicviz are comparing it to the libraries listed below
Sorting:
- A spectral method for assessing and combining multiple data visualizations☆50Updated 2 years ago
- Testing if UMAP/tSNE overfit their intrinsic dimensionality☆16Updated 2 years ago
- Parallel opt-SNE implementation with Python wrapper☆38Updated 3 years ago
- All code necessary for reconstructing Bonsai-trees on high-dimensional data and visualizing them in Bonsai-scout☆84Updated 2 months ago
- Algorithmically create or extend categorical colour palettes☆227Updated 3 months ago
- Self-supervised models for encoding protein localization patterns from microscopy images☆79Updated 5 months ago
- Contrastive PCA☆231Updated 3 months ago
- The art of using t-SNE for single-cell transcriptomics☆130Updated last year
- generalized principal component analysis (GLM-PCA) implemented in python☆61Updated 4 years ago
- Biological Network Integration using Convolutions☆63Updated 2 years ago
- Creating multi-resolution embeddings and clusters from high dimensional data☆57Updated last year
- Tools for building and manipulating graphs in Python☆46Updated last month
- Python port of the Unidip clustering algorithm from: http://www.kdd.org/kdd2016/subtopic/view/skinny-dip-clustering-in-a-sea-of-noise☆37Updated 2 years ago
- Unsupervised visualization of image datasets using contrastive learning☆115Updated 8 months ago
- ☆56Updated last year
- Benchmark agents on BioML tasks☆63Updated 4 months ago
- A Python package to make publication-ready but customizable coefficient plots.☆137Updated last year
- ☆15Updated 5 years ago
- Systematically learn and evaluate manifolds from high-dimensional data☆104Updated 3 months ago
- Contrastive neighbor embeddings☆57Updated 2 months ago
- ☆10Updated last year
- Single-cell multi-omics integration using Optimal Transport☆48Updated 5 months ago
- EmbedGEM: A framework to evaluate the utility of embeddings for genetic discovery☆22Updated last year
- Hierarchical Uniform Manifold Approximation and Projection☆239Updated 11 months ago
- Self-Supervised Vision Transformers for multiplexed imaging datasets☆60Updated last year
- Picasso: a methods for embedding points in 2D in a way that respects distances while fitting a user-specified shape.☆72Updated 3 months ago
- Jupyter notebooks and Python scripts associated with experiments and analyses presented in "Dynamic visualization of high-dimensional dat…☆26Updated 2 years ago
- Subpopulation detection in high-dimensional single-cell data☆73Updated 5 years ago
- A Shared Nearest Neighbors clustering implementation. This code is basically a wrapper of sklearn DBSCAN, implementing the neighborhood s…☆16Updated 4 years ago
- Explaining dimensionality results using SHAP values☆55Updated 2 weeks ago