☆56Sep 11, 2024Updated last year
Alternatives and similar repositories for KaggleOpenVaccine
Users that are interested in KaggleOpenVaccine are comparing it to the libraries listed below
Sorting:
- ☆95Oct 9, 2024Updated last year
- ☆18Jun 22, 2024Updated last year
- Code for "Optimizing 5’UTRs for mRNA-delivered gene editing using deep learning"☆24Jul 2, 2024Updated last year
- Saluki, a method to predict mRNA half-lives from sequence☆27Oct 7, 2022Updated 3 years ago
- Redis multi-dimensional query library in Lua☆14Dec 15, 2015Updated 10 years ago
- Transcriptome State Perturbation Generator☆13Dec 3, 2021Updated 4 years ago
- Codon optimizer for tissue-specific expression☆17Sep 26, 2024Updated last year
- A guide to using the Python scRNA-seq analysis package Scanpy from R☆15Apr 27, 2020Updated 5 years ago
- A collection of project templates and useful functions for single-cell data analysis with Scanpy.☆21Jun 12, 2023Updated 2 years ago
- Visualize global properties of large RNAs using GraphViz force-directed layout.☆23Sep 7, 2023Updated 2 years ago
- Differential Mutation Analysis☆11May 24, 2020Updated 5 years ago
- Base-pair resolution detection of transcription factor binding site by deep deconvolutional network☆10Sep 12, 2017Updated 8 years ago
- Predict the boundary of transcript start and end from RNA-seq reads alignment☆11Feb 13, 2017Updated 9 years ago
- A complete AI-powered organizational structure: 42 agents, 10 playbooks, one company.☆33Jan 5, 2026Updated 2 months ago
- Use cases for anndata.☆14Jun 11, 2025Updated 9 months ago
- ☆72Feb 14, 2025Updated last year
- Repo for advertising and organizing CIViC unconference/meeting activities☆10Jul 24, 2025Updated 7 months ago
- Species-aware DNA language modeling☆18Jan 25, 2023Updated 3 years ago
- ☆15Jan 19, 2018Updated 8 years ago
- ☆13Jul 5, 2019Updated 6 years ago
- BOSTIn is a new, user-friendly phylogenetic artifact identification package.☆11Jan 20, 2026Updated 2 months ago
- Train and fine-tune diffusion models. Perform image-to-image class transfer experiments.☆15Feb 13, 2025Updated last year
- A computational method to optimize degenerate codons for synthesizing an informed combinatorial mutagenesis protein variant library☆17Feb 18, 2025Updated last year
- ☆13Feb 20, 2022Updated 4 years ago
- A python implementation of the Burrows Wheeler Alignment for DNA sequence matching☆15Aug 23, 2018Updated 7 years ago
- Base implementation of the Multi-Encoder Variational AutoEncoder (ME-VAE)☆10Feb 28, 2022Updated 4 years ago
- ☆16Oct 3, 2025Updated 5 months ago
- APA Regression Net - Predict and Engineer Alternative Polyadenylation☆40Oct 1, 2021Updated 4 years ago
- Inverted Repeats Finder: a program to analyze DNA and RNA sequences☆21Feb 21, 2025Updated last year
- ☆11Dec 31, 2020Updated 5 years ago
- PEDLA: predicting enhancers with deep learning-based algorithmic framework☆16Jan 6, 2016Updated 10 years ago
- ☆17Oct 21, 2018Updated 7 years ago
- Ensemble Smoother with Multiple Data Assimilation☆12May 8, 2024Updated last year
- Code accompanying the paper "Deciphering regulatory DNA sequences and noncoding genetic variants using neural network models of massively…☆12Aug 26, 2021Updated 4 years ago
- SpliceTransformer(SpTransformer) is a deep learning tool to predict tissue specific splicing site from pre-mRNA sequence☆31Nov 22, 2024Updated last year
- Label Free Prediction of Cell Painting from Brightfield Images☆34Jul 7, 2022Updated 3 years ago
- ☆20Mar 20, 2022Updated 4 years ago
- NeoFuse is a user-friendly pipeline for the prediction of fusion neoantigens from tumor RNA-seq data.☆20Aug 9, 2022Updated 3 years ago
- Python utility to estimate, compare, and reweight RNA energetics across many secondary structure algorithms.☆107Nov 20, 2025Updated 4 months ago