Alternatives and similar repositories for KaggleOpenVaccine

Users that are interested in KaggleOpenVaccine are comparing it to the libraries listed below

• HallLab / pandas-genomics
  Pandas ExtensionDtypes for dealing with genomics data
  ☆47Updated 8 months ago
• scottyler89 / umap_tsne_experiment
  Testing if UMAP/tSNE overfit their intrinsic dimensionality
  ☆16Updated 2 years ago
• AstraZeneca / awesome-drug-pair-scoring
  Readings for "A Unified View of Relational Deep Learning for Drug Pair Scoring." (IJCAI 2022)
  ☆98Updated 3 years ago
• erinhwilson / dna-pytorch-tutorial
  a super basic tutorial on how to create a pytorch models for raw DNA sequences
  ☆26Updated 3 years ago
• science-machine / biomlbench
  Benchmark agents on BioML tasks
  ☆63Updated 4 months ago
• aws-samples / amazon-sagemaker-protein-classification
  Implementation of Protein Classification based on subcellular localization using ProtBert(Rostlab/prot_bert_bfd_localization) model from …
  ☆42Updated last year
• shu65 / open-problems-multimodal
  1st place solution of Kaggle Open Problems - Multimodal Single-Cell Integration
  ☆44Updated 2 years ago
• rongstat / meta-visualization
  A spectral method for assessing and combining multiple data visualizations
  ☆50Updated 2 years ago
• sunericd / dynamicviz
  ☆61Updated last year
• OpenBioML / project-proposal-template
  The project proposal template for OpenBioML community projects.
  ☆18Updated 2 years ago
• songlab-cal / factored-attention
  This repository contains code for reproducing results in our paper Interpreting Potts and Transformer Protein Models Through the Lens of …
  ☆59Updated 3 years ago
• cansyl / DEEPred
  ☆25Updated 3 years ago
• ml-jku / DeepRC
  DeepRC: Immune repertoire classification with attention-based deep massive multiple instance learning
  ☆125Updated 2 years ago
• Google-Health / genomics-research
  ☆154Updated last year
• AstraZeneca / skywalkR
  code for Gogleva et al manuscript
  ☆46Updated 3 years ago
• bowang-lab / scFormer
  ☆19Updated 2 years ago
• p-koo / deepomics
  deep learning toolkit (written on top of tensorflow) to streamline computational biology analysis
  ☆22Updated 2 years ago
• genedisco / genedisco-starter
  The starter repository for submissions to the GeneDisco challenge for optimized experimental design in genetic perturbation experiments.
  ☆24Updated 3 years ago
• NikolayOskolkov / HowUMAPWorks
  Here I explain the math behind UMAP and show how to program it from scratch in Python
  ☆38Updated 5 years ago
• GillesVandewiele / covid19-mrna-degradation-prediction
  Fourth place solution to the "OpenVaccine: COVID-19 mRNA Vaccine Degradation Prediction" organized by Stanford University and Kaggle
  ☆21Updated 5 years ago
• gcorso / NeuroSEED
  Implementation of Neural Distance Embeddings for Biological Sequences (NeuroSEED) in PyTorch (NeurIPS 2021)
  ☆73Updated 2 years ago
• WaymentSteeleLab / arnie
  Python utility to estimate, compare, and reweight RNA energetics across many secondary structure algorithms.
  ☆106Updated 2 months ago
• kexinhuang12345 / ml-genomics-resources
  Machine Learning for Genomics and Therapeutics Resources (Cell Patterns)
  ☆80Updated 4 years ago
• biocypher / project-template
  Template for creating a BioCypher-driven knowledge graph
  ☆13Updated 3 weeks ago
• IBM / depiction
  interpret deep learning models in a framework-independent fashion
  ☆41Updated 4 months ago
• lightonai / RITA
  RITA is a family of autoregressive protein models, developed by LightOn in collaboration with the OATML group at Oxford and the Debora Ma…
  ☆99Updated 3 years ago
• technion-cs-nlp / BiologicalTokenizers
  Effect of tokenization on transformers for biological sequence
  ☆21Updated last month
• Lightning-Universe / Research-template
  Quickest way to share everything about your research within a single app
  ☆37Updated last year
• wilsonjr / ClusterShapley
  Explaining dimensionality results using SHAP values
  ☆55Updated last month
• ml-jku / DNA-xLSTM
  ☆17Updated last year