Alternatives and similar repositories for seqtrace:

Users that are interested in seqtrace are comparing it to the libraries listed below

• addityea / ASAP
  Automated Sanger Analysis Pipeline (ASAP): a tool for rapidly analyzing Sanger sequencing data with minimum user interference.
  ☆25Updated last month
• IOB-Muenster / nanopipe2
  The NanoPipe pipeline analyzes reads generated by the Oxford Nanopore sequencing devices. As a result, it provides alignments to any targ…
  ☆18Updated 6 years ago
• mourisl / Rcorrector
  Error correction for Illumina RNA-seq reads
  ☆65Updated last year
• Serka-M / Digester-MultiSequencing
  Repository for scripts and resources used for metagenomics with Nanopore, PacBio and Illumina sequencing
  ☆21Updated 2 years ago
• happykhan / BRIG
  BRIG is a cross-platform (Windows/Mac/Unix) application that can display circular comparisons between a large number of genomes, with a f…
  ☆34Updated 6 years ago
• aquaskyline / SOAPdenovo-Trans
  SOAPdenovo-Trans, a de novo transcriptome assembler designed specifically for RNA-Seq. We evaluated its performance on transcriptome data…
  ☆34Updated last year
• ToniWestbrook / paladin
  Protein Alignment and Detection Interface
  ☆61Updated 11 months ago
• tseemann / PEAR
  Pair-End AssembeR
  ☆31Updated 10 years ago
• sepsis-omics / tutorials
  Tutorials on how to use the microGVL to do common bacterial bioinformatic tasks
  ☆25Updated 9 months ago
• wdecoster / nanolyse
  Remove lambda phage reads from a fastq file
  ☆29Updated 2 years ago
• cssmillie / StrainFinder
  StrainFinder
  ☆26Updated 6 years ago
• bhattlab / lathe
  A tool for generating bacterial genomes from metagenomes with nanopore long read sequencing
  ☆70Updated 3 years ago
• epi2me-labs / wf-artic
  ARTIC SARS-CoV-2 workflow and reporting
  ☆50Updated 3 months ago
• jonas-fuchs / varVAMP
  Design degenerated primers on highly variable alignments for full genome sequencing or qPCR. Specifically developed for viruses.
  ☆36Updated 2 weeks ago
• shenwei356 / unikmer
  A versatile toolkit for k-mers with taxonomic information
  ☆77Updated 7 months ago
• gatech-genemark / ProtHint
  Protein hint generation pipeline for gene finding in eukaryotic genomes
  ☆56Updated last year
• wrf / genomeGTFtools
  convert various features into a GFF-like file for use in genome browsers
  ☆70Updated 2 weeks ago
• nanoporetech / pipeline-umi-amplicon
  Workflow to prepare high accuracy single molecule consensus sequences from amplicon data using unique molecular identifiers
  ☆33Updated last year
• epi2me-labs / wf-clone-validation
  ☆29Updated 2 weeks ago
• Stephane-S / Simplot_PlusPlus
  ☆31Updated last year
• peterk87 / nf-flu
  Influenza genome analysis Nextflow workflow
  ☆26Updated 2 months ago
• pinellolab / AmpUMI
  Toolkit for the design and analysis of amplicon sequencing experiments utilizing unique molecular identifiers (UMIs)
  ☆41Updated 10 months ago
• AliTVTeam / AliTV
  Visualize whole genome alignments as linear maps
  ☆71Updated 5 months ago
• hsinnan75 / GSAlign
  GSAlign: an ultra-fast sequence alignment algorithm for intra-species genome comparison
  ☆56Updated 10 months ago
• sestaton / HMMER2GO
  Annotate DNA sequences for Gene Ontology terms
  ☆41Updated 2 years ago
• lorrainea / MARS
  MARS: improving Multiple circular sequence Alignment using Refined Sequences
  ☆28Updated 4 months ago
• cmmr / virmap
  ☆26Updated 4 years ago
• ddarriba / prottest3
  Automatically exported from code.google.com/p/prottest3
  ☆36Updated 7 years ago
• steineggerlab / conterminator
  Detection of incorrectly labeled sequences across kingdoms
  ☆82Updated 2 years ago
• ISUgenomics / SequelTools
  new repo
  ☆28Updated 3 years ago