Alternatives and similar repositories for PySanger:

Users that are interested in PySanger are comparing it to the libraries listed below

• ponnhide / sangerseq_viewer
  sangerseq_viewer is a python package to automatically visualize Sanger sequencing results and the corresponding annotated sequence map.
  ☆33Updated 8 months ago
• urmi-21 / orfipy
  Fast and flexible ORF finder
  ☆66Updated 3 years ago
• mckennalab / Circuitseq
  Nanopore Plasmid Sequencing
  ☆32Updated last year
• tseemann / PEAR
  Pair-End AssembeR
  ☆30Updated 10 years ago
• aquaskyline / SOAPdenovo-Trans
  SOAPdenovo-Trans, a de novo transcriptome assembler designed specifically for RNA-Seq. We evaluated its performance on transcriptome data…
  ☆34Updated last year
• nf-core / rnavar
  gatk4 RNA variant calling pipeline
  ☆41Updated 3 weeks ago
• ponnhide / plasmidviewer
  Python library to visualize circular plasmid maps
  ☆22Updated 3 years ago
• ygidtu / trackplot
  trackplot is a tool for visualizing various next-generation sequencing (NGS) data, including DNA-seq, RNA-seq, single-cell RNA-seq and fu…
  ☆82Updated last week
• Weeks-UNC / shapemapper2
  Public repository for ShapeMapper 2 releases
  ☆32Updated 2 months ago
• jrjhealey / bioinfo-tools
  Just a collection of (often poor) scripts to do various bits of bioinformatics stuff I find myself needing to do.
  ☆58Updated 4 years ago
• pinellolab / CRISPRitz
  Tool package to perform in-silico CRISPR analysis and assessment
  ☆22Updated 9 months ago
• novoalab / Nano-tRNAseq
  Quantitative analysis of native tRNA populations using direct RNA nanopore sequencing (Lucas*, Pryszcz* et al., Nat Biotech 2023)
  ☆14Updated 5 months ago
• pinellolab / AmpUMI
  Toolkit for the design and analysis of amplicon sequencing experiments utilizing unique molecular identifiers (UMIs)
  ☆41Updated 9 months ago
• josuebarrera / GenEra
  genEra is a fast and easy-to-use command-line tool that estimates the age of the last common ancestor of protein-coding gene families.
  ☆49Updated 2 months ago
• guyleonard / get_jgi_genomes
  A quick and easy way to download the genomes/predicted proteins of taxa available in JGI's Genome Portal.
  ☆32Updated 5 months ago
• foerstner-lab / gffpandas
  Parse GFF3 into Pandas dataframes
  ☆26Updated 11 months ago
• epi2me-labs / wf-clone-validation
  ☆28Updated last week
• cccnrc / plot-VCF
  visual analysis of your VCF files
  ☆31Updated 2 years ago
• Juke34 / awesome-awesomeness-bioinformatics
  A curated list of awesome curated lists of awesome softwares and resources in bioinformatics and affiliated areas
  ☆39Updated 3 months ago
• jsh58 / NGmerge
  Merging paired-end reads and removing adapters
  ☆44Updated 4 years ago
• ridgelab / JustOrthologs
  ☆35Updated last year
• UCSC-LoweLab / tRNAscan-SE
  A program for detection of tRNA genes
  ☆59Updated 2 years ago
• slt666666 / NLRtracker
  NLR annotation tool
  ☆23Updated 11 months ago
• BackofenLab / CRISPRidentify
  ☆27Updated last month
• KevinKuchinski / ProbeTools
  Hybridization probe design for targeted genomic sequencing of diverse and hypervariable viral taxa
  ☆23Updated last year
• ialbert / bio
  Making bioinformatics fun again
  ☆64Updated 8 months ago
• dieterich-lab / JACUSA2
  New version of JACUSA -> 2.0
  ☆24Updated 3 weeks ago
• glarue / jgi-query
  A simple command-line tool to download data from Joint Genome Institute databases
  ☆50Updated 2 years ago
• citiususc / BigSeqKit
  BigSeqKit: a parallel Big Data toolkit to process FASTA and FASTQ files at scale
  ☆56Updated last year
• ShiLab-Bioinformatics / subread
  The Subread software package is a tool kit for processing next-gen sequencing data. It includes Subread aligner, Subjunc exon-exon juncti…
  ☆41Updated last year