trans-species prediction of TFBS in plants
☆14Apr 26, 2021Updated 5 years ago
Alternatives and similar repositories for TSPTFBS
Users that are interested in TSPTFBS are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆11Mar 14, 2026Updated 7 months ago
- ☆17Nov 19, 2025Updated 11 months ago
- Create .mzML files through the R Console☆12Updated this week
- We developed GenomeSyn as a new tool for constructing and visualizing genome synteny, its novel design and implementation can serve as a …☆36Jan 3, 2022Updated 4 years ago
- PriOritizing the Candidate genes by incorporating information of Knowledge-based gene sets, Effects of variants, GWAS and TWAS☆11May 14, 2021Updated 5 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- PanEffect is a JavaScript framework to explore variant effects across a pangenome. The tool has two views that allows a user to (1) expl…☆13Jan 30, 2024Updated 2 years ago
- Pipeline of time-ordered gene coexpression network (TO-GCN) construction from three-dimensional (gene expression, condition, and time) da…☆53Jul 13, 2023Updated 3 years ago
- Identification of NBS-LRR genes in genomic sequence☆11Mar 30, 2022Updated 4 years ago
- ALignment Transformation EnviRonment☆12May 8, 2018Updated 8 years ago
- iTAK☆50Apr 8, 2026Updated 6 months ago
- Generate pan-gene sets, given a collection of genome assemblies and corresponding gene models.☆23Aug 12, 2026Updated 2 months ago
- TE Classifier Using CNN☆11Jun 25, 2024Updated 2 years ago
- Markdown version of Cytoscape manual☆12Sep 30, 2026Updated last month
- ☆19Oct 21, 2024Updated 2 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- A python program that uses ReadBack phased haplotypes in population of samples and returns extended haplotype blocks.☆15Oct 30, 2024Updated 2 years ago
- Evaluating genomic sequence models for explaining personalized expression variation☆20Dec 6, 2023Updated 2 years ago
- Dot2dot: Accurate Whole-Genome Tandem Repeats Discovery☆11Oct 5, 2022Updated 4 years ago
- BLINK: A Package for Next Level of Genome Wide Association Studies with Both Individuals and Markers in Millions☆42Mar 24, 2025Updated last year
- Methylatino phasing using PacBio CCS reads☆14Dec 13, 2024Updated last year
- Annotation Pipeline for NLR genes☆17Dec 6, 2018Updated 7 years ago
- Identification of transposable element insertion polymorphisms (TIPs) based on a pan-genome and large-scale resequencing data☆18Mar 14, 2022Updated 4 years ago
- STAG: Species Tree from All Genes☆37Dec 10, 2018Updated 7 years ago
- A tool to infer TF regulators for gene modules.☆11May 11, 2021Updated 5 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- quickly filter fastq files by matching sequences to a set of regex patterns☆60Oct 18, 2026Updated 2 weeks ago
- ☆18Nov 21, 2024Updated last year
- Python package + CLI for method to infer Ghost admixture tracts from ARGs☆11Sep 4, 2026Updated 2 months ago
- quickLD, a large-scale, long-range Linkage Disequilibrium analysis tool utilizing parallel CPU, GPU or heterogeneous computing.☆10Jun 10, 2022Updated 4 years ago
- ☆36Jun 24, 2026Updated 4 months ago
- A GAN-based method for Enhancing Hi-C data☆33Dec 17, 2020Updated 5 years ago
- Efficient compression and retrieve of genotype data with integer sparse matrices☆16Apr 11, 2025Updated last year
- PhaseGrass, a reference-based phasing workflow generating chromosome-level haplotype-resolved diploid assembly for highly heterozygous ge…☆18Jun 2, 2026Updated 5 months ago
- Visualization of Colocalization Between eQTL and GWAS Data☆91May 13, 2022Updated 4 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Quality of RNA-Seq Toolset☆53Apr 9, 2019Updated 7 years ago
- Homology-based reference genome acquisition and comparison☆19Oct 16, 2026Updated 3 weeks ago
- ☆45Dec 11, 2025Updated 10 months ago
- a tool to identify species and inter-species hybrids and chromosome copy number variants from short-read data☆20Sep 13, 2019Updated 7 years ago
- Documentation for the Helium pedigree visualization software☆17Apr 3, 2024Updated 2 years ago
- ☆27Jul 28, 2025Updated last year
- Predicting gene expression levels from genomic sequences☆55Jun 24, 2020Updated 6 years ago