liulifenyf / TSPTFBSLinks
trans-species prediction of TFBS in plants
☆14Updated 4 years ago
Alternatives and similar repositories for TSPTFBS
Users that are interested in TSPTFBS are comparing it to the libraries listed below
Sorting:
- ☆24Updated last month
- tutorial on pggb☆35Updated 8 months ago
- microRNA PREdiction From small RNA-seq data☆29Updated 7 years ago
- ☆15Updated 3 years ago
- This is a series of scripts on the rapid construction of target interval consensus sequences from bam files and the rapid construction of…☆16Updated last year
- iTAK☆43Updated last year
- IsoSeq3 - Scalable De Novo Isoform Discovery from Single-Molecule PacBio Reads☆18Updated 7 years ago
- Tool set for processing fasta/fastq/table formated data. Usually they are perl scripts.☆56Updated last month
- “When everything is connected to everything else, for better or worse, everything matters.” Bruce Mau☆19Updated 5 years ago
- TreeBeST: Tree Building guided by Species Tree (Ensembl Compara modifications)☆21Updated 5 years ago
- Project description and analytic scripts for cis/trans regulation of fiber development in G. hirsutum☆16Updated last year
- a software for annotating plant genes☆22Updated last year
- Identify and annotate TE-mediated insertions in long-read sequence data☆43Updated 2 months ago
- A scalable variant calling and benchmarking framework supporting both short and long reads.☆14Updated 10 months ago
- Simple library/pipeline to generate and handle Hi-C data.☆39Updated 10 months ago
- A pipeline for isoseq☆23Updated 7 years ago
- GENE-SWitCH project RNA-Seq analysis pipeline☆29Updated 7 months ago
- SQANTI2 is now replaced by SQANTI3. Please go to: https://github.com/ConesaLab/SQANTI3☆38Updated 5 years ago
- Long-read Isoform Quantification and Analysis☆38Updated 6 months ago
- Scripting analyses of genomes in Ensembl Plants☆40Updated 2 weeks ago
- ☆24Updated 2 years ago
- BamDeal: a comprehensive toolkit for bam manipulation☆15Updated 2 years ago
- BLINK: A Package for Next Level of Genome Wide Association Studies with Both Individuals and Markers in Millions☆38Updated 6 months ago
- Scripts and other material for the assembly and analysis of ratite genomes.☆26Updated 2 years ago
- ☆60Updated last year
- Extract longest transcript or longest CDS transcript from GTF annotation file or gencode transcripts fasta file.☆20Updated 3 years ago
- ☆27Updated 3 years ago
- Analysis of TE contribution to features (transcripts or simple features). Includes utils to test enrichment.☆27Updated 6 years ago
- Efficient Permutation-based GWAS for Normal and Skewed Phenotypic Distributions☆33Updated 10 months ago
- This toolkit deals with GEnomic sequence and genome structure ANnotation files between inbreeding lines and species.☆45Updated 2 years ago