liulifenyf / TSPTFBS
trans-species prediction of TFBS in plants
☆13Updated 3 years ago
Alternatives and similar repositories for TSPTFBS:
Users that are interested in TSPTFBS are comparing it to the libraries listed below
- “When everything is connected to everything else, for better or worse, everything matters.” Bruce Mau☆19Updated 4 years ago
- ☆24Updated 9 months ago
- ☆15Updated 2 years ago
- A pipeline for isoseq☆23Updated 6 years ago
- Tool set for processing fasta/fastq/table formated data. Usually they are perl scripts.☆53Updated this week
- microRNA PREdiction From small RNA-seq data☆29Updated 7 years ago
- tutorial on pggb☆32Updated 2 months ago
- Project description and analytic scripts for cis/trans regulation of fiber development in G. hirsutum☆16Updated last year
- The cattle Genotype-Tissue Expression atlas v1☆23Updated 2 years ago
- The code used in the manuscript titled "Gene duplication and evolution in recurring polyploidization-diploidization cycles in plants".☆28Updated 4 years ago
- ☆22Updated 2 years ago
- A tool for performing collinearity-incorporating homology inference☆29Updated last year
- BITACORA: A Bioinformatics tool for gene family annotation☆43Updated 11 months ago
- EndHic is a fast and easy-to-use Hi-C scaffolding tool, using the Hi-C links from contig end regions instead of whole contig regions to a…☆21Updated 2 years ago
- BLINK: A Package for Next Level of Genome Wide Association Studies with Both Individuals and Markers in Millions☆35Updated last week
- GENE-SWitCH project RNA-Seq analysis pipeline☆26Updated last month
- Analysis of TE contribution to features (transcripts or simple features). Includes utils to test enrichment.☆26Updated 5 years ago
- This is a series of scripts on the rapid construction of target interval consensus sequences from bam files and the rapid construction of…☆16Updated last year
- scripts for the project of seven thaliana genomes assembly☆38Updated 3 years ago
- Scripts and other material for the assembly and analysis of ratite genomes.☆26Updated 2 years ago
- Easily construct the ML species tree with single-copy gene shared by different species.☆25Updated 6 years ago
- a software for annotating plant genes☆20Updated last year
- ☆28Updated 2 years ago
- ☆23Updated 2 years ago
- A comprehensive pipeline for RNAseq data analysis☆22Updated 7 months ago
- ☆21Updated 2 years ago
- An accurate repeat detection from Nanopore data using deep learning and image techniques☆22Updated 2 years ago
- De novo annotation of young retrotransposons☆48Updated 2 years ago
- Bulked-Segregant Analysis using vcf file with or without parents☆25Updated 3 months ago
- Long-read Isoform Quantification and Analysis☆39Updated this week