liulifenyf / TSPTFBSLinks
trans-species prediction of TFBS in plants
☆14Updated 4 years ago
Alternatives and similar repositories for TSPTFBS
Users that are interested in TSPTFBS are comparing it to the libraries listed below
Sorting:
- ☆24Updated last week
- ☆15Updated 3 years ago
- ☆24Updated 2 years ago
- “When everything is connected to everything else, for better or worse, everything matters.” Bruce Mau☆19Updated 5 years ago
- Tool set for processing fasta/fastq/table formated data. Usually they are perl scripts.☆55Updated last month
- iTAK☆41Updated last year
- IsoSeq3 - Scalable De Novo Isoform Discovery from Single-Molecule PacBio Reads☆18Updated 7 years ago
- tutorial on pggb☆35Updated 6 months ago
- This is a series of scripts on the rapid construction of target interval consensus sequences from bam files and the rapid construction of…☆16Updated last year
- A pipeline for isoseq☆23Updated 7 years ago
- microRNA PREdiction From small RNA-seq data☆29Updated 7 years ago
- BamDeal: a comprehensive toolkit for bam manipulation☆15Updated 2 years ago
- Simple library/pipeline to generate and handle Hi-C data.☆38Updated 8 months ago
- Scripting analyses of genomes in Ensembl Plants☆40Updated 3 weeks ago
- BITACORA: A Bioinformatics tool for gene family annotation☆46Updated 2 months ago
- Extract longest transcript or longest CDS transcript from GTF annotation file or gencode transcripts fasta file.☆20Updated 3 years ago
- a software for annotating plant genes☆22Updated last year
- Scripts and other material for the assembly and analysis of ratite genomes.☆26Updated 2 years ago
- scripts for the project of seven thaliana genomes assembly☆40Updated 4 years ago
- A genome annotation pipeline that use short and long sequencing reads alignments from animal genomes☆30Updated last year
- Efficient Permutation-based GWAS for Normal and Skewed Phenotypic Distributions☆31Updated 8 months ago
- We developed a protocol of in situ high throughput multi-way contact long read Pore-C sequencing (in situ HiPore-C), a strategy that inte…☆20Updated last year
- Project description and analytic scripts for cis/trans regulation of fiber development in G. hirsutum☆16Updated last year
- Method for inferring path posterior probabilities and abundances from pangenome graph read alignments☆57Updated 7 months ago
- ☆21Updated 2 years ago
- Code for Article "A pan-genome of 69 Arabidopsis thaliana accessions reveals a conserved genome structure throughout the global species r…☆23Updated last year
- EndHic is a fast and easy-to-use Hi-C scaffolding tool, using the Hi-C links from contig end regions instead of whole contig regions to a…☆23Updated 2 years ago
- LDBlockShow: a fast and convenient tool for visualizing linkage disequilibrium and haplotype blocks based on VCF files☆32Updated last month
- Plant genome assembly and annotation pipeline using snakemake☆44Updated 2 months ago
- BLINK: A Package for Next Level of Genome Wide Association Studies with Both Individuals and Markers in Millions☆38Updated 4 months ago