Alternatives and similar repositories for pet-pilot-2023

Users that are interested in pet-pilot-2023 are comparing it to the libraries listed below

• seanrjohnson / protein_scoring
  Generating and scoring novel enzyme sequences with a variety of models and metrics
  ☆71Updated 3 months ago
• AIforGreatGood / biotransfer
  Machine learning-driven antibody design
  ☆60Updated 2 years ago
• gitter-lab / metl
  Mutational Effect Transfer Learning (METL) framework for pretraining and finetuning biophysics-informed protein language models
  ☆54Updated 3 weeks ago
• KULL-Centre / _2024_cagiada_stability
  ☆71Updated 6 months ago
• Exscientia / abodybuilder3
  ☆68Updated 11 months ago
• KULL-Centre / _2023_Blaabjerg_SSEmb
  ☆39Updated last year
• AbSciBio / igdesign
  ☆47Updated 9 months ago
• jonfunk21 / ProteusAI
  ProteusAI is a library for the machine learning driven engineering of proteins. The library enables workflows from protein structure pred…
  ☆63Updated last month
• CongLabCode / RoseTTAFold2-PPI
  Fast deep learning methods for large-scale protein-protein interaction screening
  ☆78Updated 2 months ago
• HySonLab / Directed_Evolution
  Protein Design by Machine Learning guided Directed Evolution
  ☆47Updated 6 months ago
• swanss / FragFold
  Fragment binding prediction with ColabFold
  ☆37Updated 6 months ago
• kWeissenow / EMBER3D
  Ultra-fast in-silico structure mutation
  ☆34Updated 6 months ago
• uci-cbcl / esm-efficient
  Efficient implementatin of ESM family.
  ☆74Updated last month
• rohitsinghlab / raygun
  Template-based protein design with Raygun
  ☆73Updated last month
• Kuhlman-Lab / alphafold3
  Kuhlman Lab Installation of AlphaFold3
  ☆34Updated last week
• jsunn-y / ALDE
  Active Learning-Assisted Directed Evolution for Protein Engineering
  ☆67Updated 10 months ago
• bwicky / oligomer_hallucination
  ☆36Updated last year
• adaptyvbio / competition_metrics
  Metrics for our protein design competitions.
  ☆35Updated 11 months ago
• zzhangzzhang / pLMs-interpretability
  ☆29Updated 11 months ago
• idmjky / EvolvePro
  PLM based active learning model for protein engineering
  ☆83Updated last year
• Profluent-AI / proseLM-public
  Adapting protein language models for structure-conditioned design
  ☆41Updated last year
• flyark / AFM-LIS
  Local Interaction Score (LIS) Calculation from AlphaFold-Multimer (Enhanced Protein-Protein Interaction Discovery via AlphaFold-Multimer)
  ☆58Updated 6 months ago
• Rocklin-Lab / cdna-display-proteolysis-pipeline
  ☆25Updated 2 years ago
• luo-group / ConFit
  Contrastive fitness learning: Reprogramming protein language models for low-N learning of protein fitness landscape
  ☆31Updated last year
• oxpig / AbLang2
  An antibody-specific language model focusing on NGL prediction
  ☆31Updated last year
• manifoldbio / mber-open
  mBER - Manifold Binder Engineering and Refinement. mBER enables antibody binder design by leveraging structure templates and sequence con…
  ☆52Updated last week
• MSDLLCpapers / promb
  Humanness of de-novo designed proteins
  ☆27Updated 4 months ago
• jwohlwend / minifold
  MiniFold: Simple, Fast and Accurate Protein Structure Prediction
  ☆73Updated 3 months ago
• JSchlensok / VespaG
  Expert-Guided Protein Language Models enable Accurate and Blazingly Fast Fitness Prediction
  ☆15Updated 3 weeks ago
• teevee112 / NetSolP-1.0
  Predicts the solubility and usability for purification of proteins expressed in E. coli using protein language models
  ☆39Updated 9 months ago