asari, metabolomics data preprocessing
☆65Jun 18, 2026Updated this week
Alternatives and similar repositories for asari
Users that are interested in asari are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Python pipeline for metabolomics data preprocessing, QC, standardization and annotation☆19Mar 26, 2026Updated 2 months ago
- ☆12Jan 16, 2025Updated last year
- TidyMS: Tools for working with MS data in untargeted metabolomics☆62Jul 13, 2024Updated last year
- MetEx is a tool to extract and annotate metabolites from liquid chromatography–mass spectrometry data.☆18Nov 14, 2023Updated 2 years ago
- Python library for large-scale targeted metabolomics.☆23Mar 2, 2026Updated 3 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- a python package for molecular formula analysis in MS-based small molecule studies☆36Jan 28, 2026Updated 4 months ago
- 🤖 MetaboT 🍵 is an AI system that accelerates mass spectrometry-(MS) based metabolomics knowledge graph mining☆30May 7, 2026Updated last month
- The similarity score for spectral comparison☆89Mar 5, 2025Updated last year
- Nextflow-powered MS-DIAL☆13May 30, 2026Updated 2 weeks ago
- A set of metabolomics tools for use in Galaxy☆11Sep 2, 2022Updated 3 years ago
- Package to perform annotations of features from LC-MS All-ion fragmentation (AIF) metabolomics datasets☆14May 28, 2026Updated 3 weeks ago
- ☆28Jun 2, 2026Updated 2 weeks ago
- data processing for MS-based metabolomics☆15May 28, 2026Updated 3 weeks ago
- A Tool for automated Optimization of XCMS Parameters☆34Nov 27, 2022Updated 3 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- ☆28Nov 30, 2023Updated 2 years ago
- Spectral entropy for mass spectrometry data.☆37Jun 8, 2026Updated last week
- A Bioconductor R package - Automated Evaluation of Precursor Ion Purity for Mass Spectrometry Based Fragmentation in Metabolomics☆16Mar 12, 2026Updated 3 months ago
- pathway and network analysis for metabolomics☆44Dec 8, 2025Updated 6 months ago
- ☆27Mar 20, 2026Updated 2 months ago
- Metabolomics software for database-assisted deconvolution of MS/MS spectra☆20Jan 24, 2024Updated 2 years ago
- Using MASST or fastMASST, adding metadata onto a tree ontology for microbes☆26May 26, 2026Updated 3 weeks ago
- Autonomous and accurate clustering of co-localized ion images in a self-supervised manner.☆12Dec 22, 2021Updated 4 years ago
- R Interface to the ClassyFire REST API☆14May 20, 2026Updated 3 weeks ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- FBMN-STATS: A hitchhiker's guide to statistical analysis of Feature-based Molecular Networks☆49Jun 23, 2025Updated 11 months ago
- ☆30Feb 9, 2024Updated 2 years ago
- PathIntegrate Python package for pathway-based multi-omics data integration☆19Nov 9, 2024Updated last year
- A global network optimization approach for untargeted LC-MS metabolomics data annotation and metabolite discovery☆51Aug 28, 2023Updated 2 years ago
- A "fairly fast" ISOtope PAttern Calculator for Python☆13Sep 27, 2023Updated 2 years ago
- ☆12Jul 10, 2022Updated 3 years ago
- Untargeted metabolomics workflow for data processing and analysis written in Jupyter notebooks (Python)☆24Nov 11, 2024Updated last year
- Realtime quality control for mass spectrometry data acquisition☆22May 19, 2026Updated 3 weeks ago
- A bioinformatic tool facilitating automated in-source fragmentation identification☆10Sep 6, 2022Updated 3 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- This repo contains the code needed to run the R package Autotuner. Autotuner is used to identify proper parameters during metabolomics da…☆16Jan 21, 2021Updated 5 years ago
- 5-day workshop on Metabolomics and Data Analysis☆18Sep 1, 2019Updated 6 years ago
- The Mass Spec Query Language (MassQL) is a domain specific language meant to be a succinct way to express a query in a mass spectrometry …☆57Apr 23, 2026Updated last month
- Intrinsic Peak Analysis (IPA) pipeline for peak-picking in large-scale untargeted small molecule analysis including metabolomics, lipidom…☆16Jun 1, 2023Updated 3 years ago
- ☆122Apr 8, 2023Updated 3 years ago
- SIRIUS is a software for discovering a landscape of de-novo identification of metabolites using tandem mass spectrometry. This repository…☆154Jun 1, 2026Updated 2 weeks ago