AllenInstitute / AIBSOPT
Optical projection tomography microscope for isotropic whole-brain imaging
☆15Updated 3 years ago
Alternatives and similar repositories for AIBSOPT
Users that are interested in AIBSOPT are comparing it to the libraries listed below
Sorting:
- MATLAB Streaming Image Viewer - a viewing and analysis platform for ultra-large 3D imaging data☆14Updated 4 years ago
- ABBA - Aligning Big Brains and Atlases (2D sections to 3D atlas registration)☆49Updated 2 months ago
- This toolbox includes routines for using principal component analysis (PCA) and independent component analysis (ICA) to extract cellular …☆26Updated 6 years ago
- ClearMap is a python toolbox for the analysis and registration of volumetric data from cleared tissues.☆53Updated 4 years ago
- Serial-section automated anatomy extension for ScanImage☆12Updated last month
- Code for the image processing and analysis described our Nature Protocols paper.☆10Updated 9 years ago
- motion correction☆17Updated 2 years ago
- 3-D imaging visualisation through slicing☆29Updated 4 months ago
- Segmentation of anatomical structures in a common coordinate space☆32Updated last week
- Brainways☆17Updated 2 weeks ago
- Match suite2p ROIs between imaging sessions☆25Updated 6 years ago
- Rendering anatomical heatmaps with brainrender and matplotlib☆40Updated last week
- HNCcorr algorithm for neuron identification in calcium imaging datasets.☆12Updated 2 years ago
- A MATLAB toolbox for running behavioral neuroscience experiments and managing data☆33Updated 11 months ago
- Online documentation and reference for CLIJ☆28Updated 3 years ago
- A modular package to control stimulation and track behaviour☆44Updated 6 months ago
- TREES toolbox☆28Updated 3 weeks ago
- Z-Brain Viewer and Analysis Scripts for MAP-Mapping☆22Updated last month
- Flow-Registration toolbox for 2P motion compensation☆23Updated 9 months ago
- ☆8Updated 3 years ago
- Open source ca imaging processing tools to aquire neural traces from 2 photon image sequences☆13Updated last month
- Implementation of "Precise Mapping of Single Neurons by Calibrated 3D Reconstruction of Brain Slices Reveals Topographic Projection in Mo…☆14Updated 2 years ago
- Tools to register histological section images and cell count locations to mouse brain atlas☆25Updated 2 years ago
- ☆18Updated 3 years ago
- A table containing imaging analysis tools for biology, with a focus on calcium imaging.☆49Updated last year
- Live Mouse Tracker analysis☆28Updated last month
- IaC codebase for the NeuroCAAS Platform☆37Updated last year
- This repository contains code used for the fly brain activity experiments☆18Updated 2 years ago
- CloudReg☆11Updated last year
- ☆34Updated last year