Alternatives and similar repositories for tjd-shared-code

Users that are interested in tjd-shared-code are comparing it to the libraries listed below

• murthylab / GLMHMM
  ☆24Updated 6 years ago
• gloewing / photometry_FLMM
  Code for Functional Mixed Models for Fiber Photometry
  ☆13Updated 5 months ago
• petersaj / AP_histology
  Histology processing
  ☆72Updated last month
• Whitlock-Group / HERBS
  ☆52Updated last year
• cortex-lab / allenCCF
  Tools to work with Allen Inst CCF data in matlab
  ☆143Updated 6 months ago
• joao-semedo / communication-subspace
  Code for "Cortical areas interact through a communication subspace", Semedo et al. (Neuron, 2019)
  ☆46Updated 6 years ago
• cortex-lab / Rigbox
  A MATLAB toolbox for running behavioral neuroscience experiments and managing data
  ☆32Updated last year
• DeNardoLab / BehaviorDEPOT
  Repository for BehaviorDEPOT pipeline app files and source code
  ☆38Updated 2 weeks ago
• cortex-lab / sortingQuality
  Functions to assess quality of spike sorting results
  ☆34Updated 2 years ago
• wildrootlab / SHARCQ
  Tools to register histological section images and cell count locations to mouse brain atlas
  ☆28Updated 3 years ago
• nicholas-roy / psytrack
  ☆57Updated 10 months ago
• zashwood / ssm
  Bayesian learning and inference for state space models
  ☆14Updated 4 years ago
• buzsakilab / 3d_print_designs
  ☆18Updated 3 weeks ago
• benengx / encodingmodel
  Generate a matrix of predictors corresponding to different behavioral variables and process a regression-based encoding model to obtain t…
  ☆18Updated 6 years ago
• petersaj / neuropixels_trajectory_explorer
  Neuropixels trajectory explorer with the Allen CCF mouse atlas
  ☆80Updated 9 months ago
• zivlab / CellReg
  Registration of cells across sessions.
  ☆75Updated last year
• zivlab / island
  Revealing neural correlates of behavior without behavioral measurements
  ☆16Updated 6 years ago
• EnnyvanBeest / UnitMatch
  Ephys toolbox to match single units (electrophysiology) either within the same day (over splits) or across two days
  ☆73Updated this week
• CaliAli-PV / CaliAli
  Calcium imaging inter-session alignment
  ☆15Updated last month
• denisecailab / minian
  miniscope analysis pipeline with interactive visualizations
  ☆98Updated last year
• mdhumphries / SpikeTrainCommunitiesToolBox
  MATLAB toolbox for spike-train community detection
  ☆15Updated last year
• SjulsonLab / methods_class
  "Approaches to Study Neural Circuits" course
  ☆65Updated last year
• zashwood / glm-hmm
  Code to reproduce figures for "Mice alternate between discrete strategies during perceptual decision-making" from Ashwood, Roy, Stone, IB…
  ☆55Updated 2 years ago
• cwindolf / dartsort
  ☆27Updated last week
• ikinsella / locaNMF
  Pytorch implementation of LocaNMF
  ☆36Updated 5 years ago
• talialerner / Photometry-Analysis-Shared
  ☆12Updated 9 years ago
• PeyracheLab / Class-Decoding
  Supervised and unsupervised techniques to decode signals from a population of neurons: the case of head-direction cells.
  ☆12Updated 5 years ago
• int-brain-lab / iblapps
  pyqt5 dependent applications for IBL sessions
  ☆32Updated 3 months ago
• cortex-lab / spikes
  cortex lab code for electrophysiology
  ☆85Updated last year
• m-beau / NeuroPyxels
  NeuroPyxels (npyx) is a python library built for electrophysiologists using Neuropixels electrodes. This package stems from the need of a…
  ☆139Updated last month