A high-performance deep-learning-based pipeline for whole-brain vasculature segmentation at the capillary resolution
β15Apr 29, 2024Updated 2 years ago
Alternatives and similar repositories for HP-VSP
Users that are interested in HP-VSP are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- MATLAB GUIs for ToF-MRA data preprocessing, cerebrovascular segmentation and quantificationβ23Jan 21, 2025Updated last year
- π¬π₯ Automated Blood Vasculature Analysis of 3D Light-Sheet Image Volumesβ55Jun 6, 2024Updated 2 years ago
- BRAVE-NET: Fully Automated Brain Vessel Segmentation In Patients with Cerebrovascular Diseaseβ46Mar 24, 2020Updated 6 years ago
- β24Nov 13, 2024Updated last year
- Python Vascular Network Analysisβ28Jul 15, 2026Updated last week
- Managed Database hosting by DigitalOcean β’ AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Cranio-Maxillofacial registrationβ14Updated this week
- Experimental code and examples for: Automated analysis of whole brain vasculature using machine learningβ77Aug 23, 2021Updated 4 years ago
- Sequential vessel segmentation via deep channel attention networkβ31Aug 4, 2023Updated 2 years ago
- β18Aug 7, 2023Updated 2 years ago
- β10Jun 2, 2023Updated 3 years ago
- This is a reconstruction pipeline to reconstruct raw MRI data acquired with a Siemens MR scanner using gradient recalled echo (GRE) sequeβ¦β31Oct 16, 2019Updated 6 years ago
- Official implementation of Masked-Attention Transformers for Surgical Instrument Segmentationβ22Jun 12, 2024Updated 2 years ago
- Python-based software utilizing deep learning techniques to segment high-resolution time-of-flight MRI angiography data with high sensitiβ¦β30Apr 13, 2026Updated 3 months ago
- Deep 3D Vessel Segmentation based on Cross Transformer Networkβ22Aug 10, 2022Updated 3 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer β’ AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- The public brain 3D vessel datasets, include TubeTK and MIDAS.β45Nov 16, 2021Updated 4 years ago
- Package to compute the evaluation metrics for MICCAI TopCoW2024 challengeβ17Sep 24, 2024Updated last year
- VascuSynth: Vascular Tree Synthesis Softwareβ11Nov 23, 2022Updated 3 years ago
- Solution of the RSNA/ASNR/MICCAI Brain Tumor Segmentation (BraTS) Challenge 2021β19Jul 19, 2022Updated 4 years ago
- NoSQL-based (MongoDB) medical image archive for managing the DICOM images (i.e. miniPACS).β13Nov 15, 2024Updated last year
- (Paper) On the Diffusion Process in Photoplethysmography Imagingβ15Jul 31, 2019Updated 6 years ago
- 2D/3D biopolymer network extraction and quantification.β21Mar 29, 2026Updated 3 months ago
- β17May 16, 2024Updated 2 years ago
- Official imagej plugin of the "SACD" -v1.1.3β12Feb 8, 2024Updated 2 years ago
- GPUs on demand by Runpod - Special Offer Available β’ AdRun AI, ML, and HPC workloads on powerful cloud GPUsβwithout limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- ClearMap 2 with WobblyStitcher, TubeMap and CellMapβ143Updated this week
- TubeTK is an open-source toolkit for the segmentation, registration, and analysis of tubes and surfaces in images, developed by Kitware, β¦β57Apr 23, 2026Updated 3 months ago
- A dataset of whole heart and great vessel segmentation of chd_segmentation is published.β27Nov 2, 2023Updated 2 years ago
- script to convert MPL cmaps to an XML format readable by ITK-SNAPβ13Feb 15, 2024Updated 2 years ago
- Extract regions of interest based on correlated pixel intensityβ24May 9, 2017Updated 9 years ago
- brainCOLOR project: brain image labeling protocol and optimal colormap designed for brain imagesβ19Mar 28, 2019Updated 7 years ago
- ιι 3D Unet ε°εΏθηε ηεθ(ε ε« ε·¦ε ηεθγζε ηεθγε·¦θΏ΄ζζ―γε·¦ειζ―γε³εΎιζ―η) εε²εΊδΎοΌε Άδ»ηεΎηΊζη¨εε Άη η©Άζ―η§ε―ζγ Dataset δΎθͺθ―ζ°ι«ι’οΌδΈ¦θͺε·± Label θ£½δ½θζγβ37Sep 26, 2021Updated 4 years ago
- A library of MATLAB functions for visualization, processing, and analysis of output from Bayesian models fit with Stan.β10Dec 17, 2021Updated 4 years ago
- β125Apr 2, 2025Updated last year
- Deploy on Railway without the complexity - Free Credits Offer β’ AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- A scalable machine learning pipeline for probe specificity prediction.β14Mar 26, 2026Updated 3 months ago
- Examples of Dielectric Breakdown simulation to generate Lichtenberg Figure(i.e. a lightning, thunder)β19Aug 25, 2020Updated 5 years ago
- β17Feb 23, 2024Updated 2 years ago
- convert a regular matlab plot to fit a dark mode theme backgroundβ12May 17, 2023Updated 3 years ago
- A package for Bayesian causal infeβ15Jan 14, 2024Updated 2 years ago
- β13Oct 23, 2023Updated 2 years ago
- β16May 8, 2025Updated last year