Alternatives and similar repositories for ScRNA-smartseq2:

Users that are interested in ScRNA-smartseq2 are comparing it to the libraries listed below

• reedliu / scRNA-codes
  ☆17Updated 5 years ago
• YuLab-SMU / tigeR
  🐯 tigeR: Tumor Immunotherapy Gene Expression Data Analysis R package
  ☆31Updated 10 months ago
• franklinhuanglab / scRNA-seq-Analysis-of-Prostate-Cancer-Samples
  Code for the manuscript "Single-cell analysis of human primary prostate cancer reveals the heterogeneity of tumor-associated epithelial c…
  ☆21Updated 2 years ago
• Changwuuu / Cuproptosis-pancancer
  ☆18Updated last year
• jmzeng1314 / mouse-xx-xy-C1
  ☆18Updated 5 years ago
• Famingzhao / NEPAL
  Calculate NEPC risk score from bulk transcriptome data or single-cell RNA-seq for prostate cancer
  ☆13Updated 4 months ago
• dengchunyu / TIP
  The source code of web server TIP, including example data.
  ☆19Updated 6 years ago
• DongqiangZeng0808 / TMEscore
  Calculating Tumor microenvironment score
  ☆28Updated 2 years ago
• arc85 / singleseqgset
  Gene set enrichment analysis for single-cell RNAseq data
  ☆27Updated 2 years ago
• CICAMS-Liu-lab / ECGEA
  ☆16Updated 4 years ago
• Xiaxy-XuLab / PanCAF
  ☆37Updated 2 years ago
• Xiang-HF-Zhang / Dichotomous-of-innate-immune-landscape
  Dichotomous of innate immune landscape
  ☆17Updated 5 years ago
• jmzeng1314 / TF_map
  ☆12Updated 4 years ago
• secrierlab / EMT
  This repository contains code for the evaluation of epithelial-to-mesenchymal transition states in cancer.
  ☆12Updated 2 years ago
• chensujun / scRNA
  ☆32Updated 3 years ago
• xiayh17 / RNAseqStat2
  ☆16Updated last year
• Japrin / scPip
  A pipeline for scRNA-seq data analysis
  ☆13Updated 3 weeks ago
• zhengtaoxiao / Single-Cell-Metabolic-Landscape
  Pipeline for characterizing metebolic heterogeneity from single-cell RNA-seq data
  ☆22Updated 3 years ago
• AndersonHu85 / ccRCC_multiomics
  ☆16Updated last year
• HuangLabUMN / oncoPredict
  An R package for drug response prediction and drug-gene association prediction.
  ☆18Updated last year
• XSLiuLab / tumor-immunogenicity-score
  TIGS (Tumor Immunogenicity Score) project https://doi.org/10.7554/eLife.49020
  ☆31Updated 3 years ago
• gatelabNW / csf_aging
  Single cell transcriptomics reveals cerebrospinal fluid immune dysregulation during healthy brain aging and cognitive impairment
  ☆27Updated last year
• bischofp / single_cell_lung_adenocarcinoma
  ☆30Updated 3 years ago
• jmzeng1314 / GSE76275-TNBC
  ☆17Updated 4 years ago
• navinlabcode / HumanBreastCellAtlas
  Repository for codes for the HBCA paper
  ☆36Updated 2 years ago
• OSU-BMBL / scread-protocol
  ☆16Updated 2 years ago
• youqiongye / HAMFA
  Hypoxia associated molecular feature analysis
  ☆35Updated 5 years ago
• single-cell-BGI / NHPCA
  ☆18Updated 3 years ago
• Precancer / SCC
  Immune evasion before tumor invasion in early squamous lung cell carcinogenesis
  ☆16Updated 3 years ago
• Famingzhao / NEPAL_RawCode
  NEPAL is to calculate neuroendocrine (NE) risk score from bulk and single-cell transcriptomics of both human and mouse prostate cancer (P…
  ☆11Updated last year