sharkLoc / rust-in-bioinformaticsLinks
A collection of genomics software tools written in Rust
☆87Updated 2 weeks ago
Alternatives and similar repositories for rust-in-bioinformatics
Users that are interested in rust-in-bioinformatics are comparing it to the libraries listed below
Sorting:
- What should perfect bioinformatic tools be like?☆142Updated last month
- bioinformatics toolkit in rust☆93Updated 2 months ago
- an API for intersections of genomic data☆136Updated last week
- long read RNA-seq quantification☆97Updated last month
- Whole Genome Alignment Tools☆212Updated last month
- a tool for inferring species tree from sequencing reads☆156Updated 2 weeks ago
- An efficient CLI to extract sequences from the SRA☆118Updated last month
- ☆133Updated last year
- ☆46Updated last week
- Grep for FASTQ files☆103Updated last week
- Experimental features for Nextflow☆48Updated 4 months ago
- Creating alignment plots from bam files☆77Updated last week
- seqfu - Sequece Fastx Utilities☆124Updated this week
- LexicMap: efficient sequence alignment against millions of prokaryotic genomes☆203Updated last month
- Metabuli: specific and sensitive metagenomic classification via joint analysis of DNA and amino acid.☆158Updated last month
- Example genomics data for tool developers☆117Updated last year
- Aligns short reads using dynamic seed size with strobemers☆186Updated last week
- Assembled Genomes Compressor☆175Updated last year
- Fast and flexible ORF finder☆76Updated 3 years ago
- Bioinformatics tool for Locus Visualisation☆148Updated last month
- Genome mapping and spliced alignment of cDNA or amino acid sequences☆107Updated 7 months ago
- A list of awesome awesomeness related to bioinformatics and associated fields☆42Updated 9 months ago
- Visualise and analyse nanopore (ONT) raw signals☆126Updated 2 weeks ago
- Phylogenetic orthology inference for comparative genomics☆77Updated last week
- genome_updater is a bash script that downloads and updates (non-redundant) snapshots of the NCBI Genomes repository (RefSeq/GenBank) with…☆162Updated last month
- ☆39Updated last week
- A Rust library and command line tool for working with genomic ranges and their data.☆100Updated last year
- Randomly subsample sequencing reads or alignments☆249Updated last week
- A lightweight platform-accelerated library for biological motif scanning using position weight matrices.☆61Updated 3 weeks ago
- List of genome assembly tools☆88Updated 3 weeks ago