A motif discovery tool to detect the occurrences of known motifs
☆20Jan 21, 2021Updated 5 years ago
Alternatives and similar repositories for MotifScan
Users that are interested in MotifScan are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A robust model for quantitative comparison of ChIP-Seq data sets.☆23May 18, 2020Updated 6 years ago
- A fast and accurate RNA secondary structure, end-to-end approach prediction method.☆13Jan 2, 2025Updated last year
- Correlation-based approach for identification of endocrine interactions☆13Jan 18, 2022Updated 4 years ago
- dv-trio provides a pipeline to call variants for a trio (father-mother-child) using DeepVariants [1]. Genomic Variant Calling Files (gVCF…☆11Feb 3, 2021Updated 5 years ago
- ☆12May 17, 2026Updated 2 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Coursera Advanced R Programming☆12Jan 18, 2023Updated 3 years ago
- Enhanced and elegant flexible peak/loop/domain -calling and analysis tool for 1D/3D genomic data.☆53Jun 17, 2025Updated last year
- PopSTR - A Population based microsatellite genotyper☆33Oct 23, 2023Updated 2 years ago
- interactive Multi Objective K-mer Analysis☆25Mar 5, 2023Updated 3 years ago
- Whole genome workflows☆13Nov 9, 2024Updated last year
- Long-read splice alignment with high accuracy☆64Sep 26, 2024Updated last year
- xGAP is an efficient, modular, extensible and fault-tolerant pipeline for massively parallelized genomic analysis/variant discovery from …☆11Oct 21, 2020Updated 5 years ago
- We developed a protocol of in situ high throughput multi-way contact long read Pore-C sequencing (in situ HiPore-C), a strategy that inte…☆23Mar 17, 2024Updated 2 years ago
- PyTorch implementation of Basenji2.☆22Apr 29, 2025Updated last year
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- FastRemap, a C++ tool for quickly remapping reads between genome assemblies based on the commonly used CrossMap tool. Link to paper: http…☆26Aug 24, 2022Updated 3 years ago
- Detecting Archaic Introgression from Population Genetic Data with S*☆10Jul 10, 2026Updated 2 weeks ago
- A de novo prediction tool of chromatin accessible regions for plant genomes☆10Aug 12, 2021Updated 4 years ago
- ☆27Jul 15, 2026Updated 2 weeks ago
- Integrative visualization of multiple omic datasets onto KEGG pathways.☆11Oct 4, 2021Updated 4 years ago
- 统计学习导论基于R应用笔记☆13Aug 9, 2020Updated 5 years ago
- TideHunter: efficient and sensitive tandem repeat detection from noisy long reads using seed-and-chain☆35Mar 4, 2026Updated 4 months ago
- TOP results by CONfident efFECT Sizes.☆15Dec 9, 2024Updated last year
- The Modular Aligner and The Modular SV Caller☆47Jul 18, 2023Updated 3 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Work from the book 'Advanced Python for Biologists'☆15Sep 12, 2018Updated 7 years ago
- ☆23May 14, 2024Updated 2 years ago
- Network Visualization using both GUI and Programming☆29Jul 3, 2026Updated 3 weeks ago
- LncADeep is an ab initio lncRNA identification and functional annotation tool based on deep learning☆29Jun 4, 2018Updated 8 years ago
- Non-parametric structural variant genotyper☆15Nov 18, 2021Updated 4 years ago
- A tool to infer TF regulators for gene modules.☆11May 11, 2021Updated 5 years ago
- Web based viewer for small to medium GFA format files, similar to Bandage☆13Jun 19, 2026Updated last month
- Human pan-genome analysis pipeline☆30Apr 30, 2020Updated 6 years ago
- ☆12Mar 21, 2026Updated 4 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Pathogen-Host Analysis Tool - A modern Next-Generation Sequencing (NGS) analysis platform☆17Dec 12, 2022Updated 3 years ago
- QTLseqr is an R package for QTL mapping using NGS Bulk Segregant Analysis☆83Jan 20, 2020Updated 6 years ago
- A module for improving the insertion sequences of structural variant calls☆33Jul 14, 2021Updated 5 years ago
- Scripts involved in our workflow for detecting CNVs from WGS data using read depth-based methods☆47Sep 20, 2022Updated 3 years ago
- Bowtie2's manual in Chinese - Bowtie2中文使用手册☆12Nov 25, 2015Updated 10 years ago
- Annotation of cryptic transposon variants using Hidden Markov Models to detect conserved terminal features.☆10Jul 3, 2026Updated 3 weeks ago
- documentation for trackViewer☆29Aug 6, 2019Updated 6 years ago