FalseColor Python is a rapid digital staining module designed for translating two-channel fluorescence images (i.e. a nuclear and cytoplasmic stain) to the traditional H&E histopathology color space.
☆35May 3, 2021Updated 5 years ago
Alternatives and similar repositories for falsecolor
Users that are interested in falsecolor are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Code and GUI for Feature-driven Local Cell Graph (FLocK): New Computational Pathology based descriptors☆18Jun 15, 2023Updated 3 years ago
- Code for the blogpost showing how to use Paquo to interact with, and classify, objects in QuPath with machine learning☆10Sep 6, 2022Updated 4 years ago
- A neural network software for using Molecular labelling to improve pathological annotation of H and E tissues☆31Jan 29, 2025Updated last year
- Python code used to train and evaluate segmentation networks for renal histopathological analysis☆16Jun 11, 2021Updated 5 years ago
- ☆45Jan 10, 2022Updated 4 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- ☆10Jan 17, 2023Updated 3 years ago
- Official code for the paper "A Good Feature Extractor Is All You Need for Weakly Supervised Pathology Slide Classification"☆18Aug 17, 2024Updated 2 years ago
- Software used by the AGH team during the ANHIR challenge.☆28Dec 14, 2020Updated 5 years ago
- TISSUE (Transcript Imputation with Spatial Single-cell Uncertainty Estimation) provides tools for estimating well-calibrated uncertainty …☆50Updated this week
- Predicting cell cycle stage from 3D single-cell nuclear-stained images☆11Jun 2, 2025Updated last year
- transform H&E image into CK image using GAN (virtual staining)☆12Nov 24, 2021Updated 4 years ago
- ITK IO for images stored in OME-Zarr format.☆10Sep 4, 2025Updated last year
- NeUroGlancer Ground Truth - annotate cell centers☆11Dec 15, 2023Updated 2 years ago
- TRICARE for AI-triaged 3D pathology (Nature BME)☆12Aug 12, 2026Updated 2 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Finding surprising needles (=features) in haystacks (=single cell/spatial genomics data).☆13Aug 26, 2026Updated 2 months ago
- an efficient data integration method for multiple spatial transcriptomics data with non- cluster-relevant effects such as the complex batc…☆17Dec 15, 2025Updated 10 months ago
- ☆36Oct 22, 2025Updated last year
- Segmentation-free Analysis of In Situ Capture data☆15Oct 7, 2026Updated 3 weeks ago
- Analysis of 3D pathology samples using weakly supervised AI - Cell☆123Jan 24, 2025Updated last year
- R package for single-cell comparative regulatory analysis☆13Jun 26, 2021Updated 5 years ago
- Scripts capable of re-creating figures from Van Valen Lab publications☆18May 9, 2022Updated 4 years ago
- Tool to visualize gigantic pathology images and use AI to segment cancer cells and present as an overlay☆76Feb 20, 2026Updated 8 months ago
- Compilation of publicly available datasets in 3D Computational Pathology☆53Sep 2, 2026Updated 2 months ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Spatial Transcriptomics Quantification pipeline for 10x Visium and H&E-stained whole slide images☆27Aug 29, 2026Updated 2 months ago
- GPU-accelerated image processing in QuPath☆16Oct 23, 2021Updated 5 years ago
- ☆43Jul 18, 2022Updated 4 years ago
- Spatial cellular architecture predicts prognosis in glioblastoma - Nature Communications☆25Dec 11, 2023Updated 2 years ago
- Implementation of Deep Learning Neural Network (RUnet) for Super-Resolution☆23Feb 9, 2020Updated 6 years ago
- An interactive exploration/visualization platform to help you lift the fog from your CRISPR analyses.☆13Nov 12, 2025Updated 11 months ago
- VeloVGI☆23Aug 21, 2025Updated last year
- Toolkit to help develop and run QuPath scripts from Eclipse and other IDEs, including over remote connections. (See README.md for more in…☆17Aug 19, 2020Updated 6 years ago
- ☆24Jun 7, 2020Updated 6 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- An unofficial implementation of "Unpaired Image Super-Resolution using Pseudo-Supervision." CVPR2020☆14Nov 26, 2021Updated 4 years ago
- Interactive applications of stlearn☆17May 1, 2023Updated 3 years ago
- Pseudotime analysis for time-series single-cell sequencing and imaging data☆14Updated this week
- deep learning pipeline repository for the paper "Geospatial immune variability illuminates differential evolution of lung adenocarcinoma…☆54May 27, 2020Updated 6 years ago
- Linked Clinical Trials (LinkedCT)☆11Oct 13, 2015Updated 11 years ago
- HistoQC is an open-source quality control tool for digital pathology slides☆332Sep 16, 2026Updated last month
- ☆18May 30, 2022Updated 4 years ago