version 1 scripts for CODA
☆64May 7, 2024Updated 2 years ago
Alternatives and similar repositories for CODA
Users that are interested in CODA are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- UNet script, model, sample data☆14Feb 19, 2025Updated last year
- ☆29Oct 31, 2024Updated last year
- Perturbation-response Score (PS) analysis is a method to quantify diverse perturbation responses and discover novel biological insights i…☆18Apr 20, 2024Updated 2 years ago
- Analysis of 3D pathology samples using weakly supervised AI - Cell☆123Jan 24, 2025Updated last year
- A Trained Network for Histopathology Image Representation☆22Jun 6, 2024Updated 2 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Piecewise alignment for layers of mosaics☆64Sep 7, 2026Updated 2 weeks ago
- ☆30Feb 20, 2025Updated last year
- End-to-end model for cell segmentation and classification☆23Sep 13, 2026Updated last week
- GWAS and rare variants tests at high speed using regenie☆16Jul 30, 2026Updated last month
- ☆20Jul 2, 2023Updated 3 years ago
- ☆45Jan 10, 2022Updated 4 years ago
- An R package for handling and analysing imaging mass cytometry data☆33May 19, 2026Updated 4 months ago
- Implementation of CellNEST method☆70Jun 23, 2026Updated 2 months ago
- A Spatial Transcriptomics Geospatial Profile Recovery System Tool through Anchors☆19Jul 24, 2025Updated last year
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- ☆51Feb 7, 2024Updated 2 years ago
- QuPath extension to work with images through OMERO's web API☆10Feb 10, 2026Updated 7 months ago
- Converts 'MultiQC' Reports into Tidy Data Frames☆19Apr 1, 2024Updated 2 years ago
- A visual–omics foundation model to bridge histopathology with spatial transcriptomics☆149Jun 3, 2025Updated last year
- Quality control of whole-slide images through multi-class semantic segmentation of artifacts☆39Jan 25, 2024Updated 2 years ago
- scTM: A package for topic modelling in transcriptomics data☆27May 1, 2024Updated 2 years ago
- ☆17Jul 13, 2024Updated 2 years ago
- AIDA phase 1 splicing QTL paper☆16Feb 17, 2026Updated 7 months ago
- ☆14Apr 4, 2023Updated 3 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- CAST package☆43Oct 26, 2024Updated last year
- QuPath extension to work with WSInfer - https://wsinfer.readthedocs.io/☆29Dec 3, 2025Updated 9 months ago
- Strip potentially identifying label and macro images from Aperio SVS whole slide image files☆37Apr 29, 2024Updated 2 years ago
- An open-source digital pathology based rapid image annotation tool☆93Aug 21, 2026Updated 3 weeks ago
- HDF5 plugin for ImageJ and Fiji.☆12Nov 5, 2024Updated last year
- C++/C code for Line Segment Detector☆13Mar 11, 2015Updated 11 years ago
- A computational tool for identification of 3D multi-modal spatial neighborhoods☆16Aug 1, 2025Updated last year
- A pixel classification based multiplexed image segmentation pipeline☆108Dec 5, 2023Updated 2 years ago
- ☆24Aug 26, 2026Updated 3 weeks ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Code & utilities for the manuscript "Lineage Recording Reveals the Phylodynamics, Plasticity and Paths of Tumor Evolution"☆14May 27, 2023Updated 3 years ago
- code related to submission of "Accurate diagnosis of lymphoma on whole slide histopathology images using deep learning"☆10May 12, 2020Updated 6 years ago
- ☆36Jan 17, 2025Updated last year
- ☆34Jan 18, 2023Updated 3 years ago
- CHAMMI: A benchmark for channel-adaptive models in microscopy imaging☆15Oct 23, 2024Updated last year
- End-to-end pipeline for segmenting cell nuclei on histology slides☆16Jul 19, 2022Updated 4 years ago
- Genome-on-Diet is a fast and memory-frugal framework for exemplifying sparsified genomics for read mapping, containment search, and metag…☆18Sep 4, 2024Updated 2 years ago