☆67Aug 27, 2025Updated 6 months ago
Alternatives and similar repositories for histoplus
Users that are interested in histoplus are comparing it to the libraries listed below
Sorting:
- ☆24Jun 6, 2023Updated 2 years ago
- H&E ROI-Level and WSI-Level Nuclei Segmentation with HoVer-Net☆10Jul 30, 2024Updated last year
- KimiaPath24: Dataset for retrieval and classification in digital pathology☆13Jun 4, 2017Updated 8 years ago
- Official code for "Improving Self-supervised Learning with Hardness-aware Dynamic Curriculum Learning: An Application to Digital Patholog…☆17Oct 15, 2021Updated 4 years ago
- A workflow for redacting PHI from whole slide images (WSI) based on the Digital Slide Archive.☆18Feb 27, 2026Updated last week
- Color Deconvolution for quantification of histological staining☆12Dec 18, 2018Updated 7 years ago
- GraphLSurv: A Scalable Survival Prediction Network with Adaptive and Sparse Structure Learning for Histopathological Whole-Slide Images -…☆12Aug 24, 2023Updated 2 years ago
- TCGA Pathology Reports in Machine Readable Text☆15Jan 2, 2024Updated 2 years ago
- GPU-accelerated image processing in QuPath☆16Oct 23, 2021Updated 4 years ago
- The official QuPath extension for InstanSeg☆29Jan 21, 2026Updated last month
- ☆46Feb 11, 2026Updated 3 weeks ago
- Joint Modelling Histology and Molecular Markers for Glioma Classification☆12Jun 4, 2025Updated 9 months ago
- ☆30Jan 19, 2026Updated last month
- Python 3 library for the augmentation & normalization of H&E images☆64Sep 12, 2022Updated 3 years ago
- QuPath extension to interactively align images☆26Aug 7, 2025Updated 6 months ago
- Evaluation framework for oncology foundation models (FMs)☆150Feb 17, 2026Updated 2 weeks ago
- Dlup are the Deep Learning Utilities for Pathology developed at the Netherlands Cancer Institute☆28Jan 31, 2026Updated last month
- Deep learning model for the prediction of microsatellite instability in colorectal cancer: a diagnostic study☆30Feb 11, 2021Updated 5 years ago
- A tiny Python library for writing multi-channel TIFF stacks.☆30Feb 23, 2026Updated last week
- This module allows users to analyze k-means & hierarchical clustering, and visualize results of Principal Component, Correspondence Analy…☆10Feb 16, 2026Updated 2 weeks ago
- This module is a tool for calculating correlations such as Partial, Tetrachoric, Intraclass correlation coefficients, Bootstrap agreement…☆11Feb 16, 2026Updated 2 weeks ago
- Coincides with blogpost for using geojson and shapely☆33Nov 16, 2020Updated 5 years ago
- ☆13Feb 20, 2026Updated 2 weeks ago
- A Python interface for NIH Reporter APIs☆11Feb 4, 2025Updated last year
- Feather - Lightweight supervised slide foundation models (ICML 2025)☆135Feb 5, 2026Updated last month
- An open-source UNet-based pipeline for nuclei segmentation in histopathology images using the PanNuke dataset. It features an interactive…☆10Jan 9, 2025Updated last year
- List of academic institutes/companies working on computer-based digital pathology image analysis☆45Aug 7, 2025Updated 6 months ago
- Computational Pathology Toolbox developed by TIA Centre, University of Warwick.☆511Updated this week
- A simple Flask application to share files☆14May 2, 2023Updated 2 years ago
- This repository contains the scripts for reproducing the results presented in Costa AC, Ahamed T, Jordan D, Stephens GJ (2023) "A Markov…☆11Sep 25, 2025Updated 5 months ago
- MESCnn: MESC classification by neural network☆10Jan 8, 2024Updated 2 years ago
- Vasculature blood flow computation and impact of astrocytic endfeet on vessels☆11Feb 26, 2025Updated last year
- Structural Equation Models based on lavaan for jamovi☆11Sep 24, 2025Updated 5 months ago
- ☆10Apr 16, 2022Updated 3 years ago
- Code associated to the publication: Scaling self-supervised learning for histopathology with masked image modeling, A. Filiot et al., Med…☆164Jan 29, 2024Updated 2 years ago
- SAM2PATH paper code repo☆44Feb 25, 2025Updated last year
- R syndRomics package☆14May 20, 2025Updated 9 months ago
- a collection of R functions for data manipulation, data analysis, and plotting☆13Oct 29, 2020Updated 5 years ago
- Bash scripts to simplify your life (let's hope so!)☆12Jul 21, 2025Updated 7 months ago