nadeemlab / ImPartialLinks
Interactive deep learning whole-cell segmentation and thresholding using partial annotations
☆39Updated 2 weeks ago
Alternatives and similar repositories for ImPartial
Users that are interested in ImPartial are comparing it to the libraries listed below
Sorting:
- An open-source digital pathology based rapid image annotation tool☆82Updated last month
- 🔬 Code-free deep segmentation for computational pathology☆55Updated last year
- A Python library for deep learning on whole-slide images☆53Updated 3 years ago
- Analysis of 3D pathology samples using weakly supervised AI - Cell☆104Updated 7 months ago
- A tool for rapidly labeling objects using deep learning feature embedding☆33Updated 2 weeks ago
- A pipeline to segment tissue from the background in histological images☆69Updated 2 years ago
- Pipeline for computational pathology☆38Updated last year
- ☆44Updated 3 years ago
- 🔥 🚀 Blazingly fast pipeline for patch-based classification in whole slide images☆80Updated last year
- Re-stained whole slide image alignment☆35Updated last year
- Quality control of whole-slide images through multi-class semantic segmentation of artifacts☆36Updated last year
- Python 3 library for the augmentation & normalization of H&E images☆58Updated 3 years ago
- ☆49Updated 3 years ago
- Topological Feature Extraction on Whole Slide Images using Graph Neural Networks.☆23Updated 5 years ago
- A neural network software for using Molecular labelling to improve pathological annotation of H and E tissues☆32Updated 7 months ago
- Deep Learning-based Frozen Section to FFPE Translation☆63Updated 11 months ago
- Deep Learning Inferred Multiplex ImmunoFluorescence for IHC Image Quantification (https://deepliif.org) [Nature Machine Intelligence'22, …☆210Updated 2 weeks ago
- GrandQC tool for tissue detection and quality control in pathology☆63Updated 6 months ago
- ⚡ Open-source software for deep learning-based digital pathology☆136Updated last year
- DLBCL-Morph dataset containing high resolution tissue microarray scans from 209 DLBCL cases, with geometric features computed using deep …☆38Updated 4 years ago
- A package for working with whole-slide data including a fast batch iterator that can be used to train deep learning models.☆105Updated 9 months ago
- Coincides with blogpost for using geojson and shapely☆33Updated 4 years ago
- Virtual Alignment of pathoLogy Image Series☆173Updated 2 months ago
- ☆20Updated 2 years ago
- Tool to visualize gigantic pathology images and use AI to segment cancer cells and present as an overlay☆73Updated 8 months ago
- A Girder plugin for pathology image annotations and analysis.☆74Updated this week
- Data and code to accompany our Nature publication☆46Updated 3 years ago
- NuInsSeg: A Fully Annotated Dataset for Nuclei Instance Segmentation in H&E-Stained Histological Images☆33Updated last year
- The official deployment of the Digital Slide Archive and HistomicsTK.☆127Updated last week
- Hibou: Foundational Models for Pathology☆74Updated 10 months ago