nadeemlab / ImPartialLinks
Interactive deep learning whole-cell segmentation and thresholding using partial annotations
☆39Updated last month
Alternatives and similar repositories for ImPartial
Users that are interested in ImPartial are comparing it to the libraries listed below
Sorting:
- An open-source digital pathology based rapid image annotation tool☆81Updated last week
- A Python library for deep learning on whole-slide images☆53Updated 3 years ago
- 🔬 Code-free deep segmentation for computational pathology☆54Updated last year
- Pipeline for computational pathology☆38Updated last year
- Analysis of 3D pathology samples using weakly supervised AI - Cell☆102Updated 6 months ago
- Quality control of whole-slide images through multi-class semantic segmentation of artifacts☆36Updated last year
- 🔥 🚀 Blazingly fast pipeline for patch-based classification in whole slide images☆74Updated last year
- ☆41Updated 3 years ago
- Re-stained whole slide image alignment☆34Updated last year
- GrandQC tool for tissue detection and quality control in pathology☆57Updated 5 months ago
- Python 3 library for the augmentation & normalization of H&E images☆58Updated 2 years ago
- A neural network software for using Molecular labelling to improve pathological annotation of H and E tissues☆32Updated 6 months ago
- Solid Tumor Associative Modeling in Pathology☆82Updated this week
- A tool for rapidly labeling objects using deep learning feature embedding☆33Updated 11 months ago
- Virtual Alignment of pathoLogy Image Series☆171Updated last month
- ☆48Updated 3 years ago
- QuPath extension for Segment Anything Model (SAM)☆114Updated last week
- DLBCL-Morph dataset containing high resolution tissue microarray scans from 209 DLBCL cases, with geometric features computed using deep …☆36Updated 4 years ago
- A pipeline to segment tissue from the background in histological images☆70Updated 2 years ago
- ⚡ Open-source software for deep learning-based digital pathology☆133Updated last year
- A Girder plugin for pathology image annotations and analysis.☆73Updated this week
- A package for working with whole-slide data including a fast batch iterator that can be used to train deep learning models.☆104Updated 8 months ago
- ☆20Updated 2 years ago
- The official deployment of the Digital Slide Archive and HistomicsTK.☆125Updated this week
- Deep Learning Inferred Multiplex ImmunoFluorescence for IHC Image Quantification (https://deepliif.org) [Nature Machine Intelligence'22, …☆205Updated last week
- Corresponding code of 'Quiros A.C.+, Coudray N.+, Yeaton A., Yang X., Chiriboga L., Karimkhan A., Narula N., Pass H., Moreira A.L., Le Qu…☆68Updated 6 months ago
- Topological Feature Extraction on Whole Slide Images using Graph Neural Networks.☆23Updated 4 years ago
- Cloud-based data annotation tools for biological images☆81Updated last year
- QuPath extension to work with WSInfer - https://wsinfer.readthedocs.io/☆24Updated last month
- Code from Foersch et al. (Under Construction / Development)☆37Updated 2 years ago