nadeemlab / ImPartial
Interactive deep learning whole-cell segmentation and thresholding using partial annotations
☆35Updated this week
Alternatives and similar repositories for ImPartial:
Users that are interested in ImPartial are comparing it to the libraries listed below
- A tool for rapidly labeling objects using deep learning feature embedding☆29Updated 5 months ago
- 🔬 Code-free deep segmentation for computational pathology☆53Updated 7 months ago
- Quality control of whole-slide images through multi-class semantic segmentation of artifacts☆30Updated 11 months ago
- Topological Feature Extraction on Whole Slide Images using Graph Neural Networks.☆22Updated 4 years ago
- An open-source digital pathology based rapid image annotation tool☆75Updated this week
- DLBCL-Morph dataset containing high resolution tissue microarray scans from 209 DLBCL cases, with geometric features computed using deep …☆36Updated 4 years ago
- Hands-on Sessions 1 and 2 at the Building Interpretable AI for Digital Pathology AMLD workshop 2021☆21Updated 3 years ago
- A Python library for deep learning on whole-slide images☆50Updated 3 years ago
- A neural network software for using Molecular labelling to improve pathological annotation of H and E tissues☆29Updated last year
- A vision language model for gigapixel whole slide images in histopathology☆30Updated 3 months ago
- 🔥 🚀 Blazingly fast pipeline for patch-based classification in whole slide images☆64Updated 6 months ago
- Python 3 library for the augmentation & normalization of H&E images☆51Updated 2 years ago
- Deep learning enabled assessment of cardiac allograft rejection from endomyocardial biopsies- Nature Medicine☆28Updated 2 years ago
- ☆43Updated last year
- Pan-cancer tils analysis study by Hongming Xu☆13Updated 4 years ago
- Data and code to accompany our Nature publication☆44Updated 2 years ago
- Robust quad-tree based registration on whole slide images☆19Updated 6 months ago
- ☆40Updated 3 years ago
- A Python library of pre- and post-processing tools for applying deep learning to whole-slide images☆17Updated 2 years ago
- Corresponding code of 'Quiros A.C.+, Coudray N.+, Yeaton A., Yang X., Chiriboga L., Karimkhan A., Narula N., Pass H., Moreira A.L., Le Qu…☆50Updated 2 months ago
- Re-stained whole slide image alignment☆32Updated last year
- Benchmarking toolkit for patch-based histopathology image classification.☆38Updated last year
- Cloud-based data annotation tools for biological images☆77Updated 11 months ago
- A pipeline to segment tissue from the background in histological images☆67Updated last year
- Analysis of 3D pathology samples using weakly supervised AI - Cell☆94Updated 4 months ago
- ☆21Updated last year
- QuPath extension to work with WSInfer - https://wsinfer.readthedocs.io/☆23Updated last month
- ☆46Updated 2 years ago
- Inference code for HoVer-NeXt☆26Updated 4 months ago
- Pipeline for computational pathology☆34Updated last year