A Template for Clear and Simple Documentation of Bioinformatics Code
☆16Jan 24, 2018Updated 8 years ago
Alternatives and similar repositories for GoodDoc
Users that are interested in GoodDoc are comparing it to the libraries listed below
Sorting:
- Gene expression viewer template☆11Aug 30, 2017Updated 8 years ago
- Search public databases for given genotypic information☆11Mar 21, 2018Updated 7 years ago
- XEnograft Visualization & Analysis☆11Oct 18, 2025Updated 4 months ago
- R/Shiny application for viewing microbial community data☆19Dec 17, 2020Updated 5 years ago
- An R data package for NIH EXPORTER data☆15Mar 8, 2025Updated 11 months ago
- Machine learning use cases for teaching☆13Jul 12, 2017Updated 8 years ago
- Sage Bionetworks derived standards for annotating content in Synapse.☆15Mar 28, 2025Updated 11 months ago
- Chromatin ACcessibility and Transcriptomics Unifying Software☆17Oct 25, 2024Updated last year
- NExt generation Analysis Toolbox☆14Oct 18, 2015Updated 10 years ago
- LEGACY repository for SODAR Core, preserved for saving review-related issues. See "sodar-core" for the up-to-date repository.☆15Jun 1, 2022Updated 3 years ago
- 🧬📈 Turn DNA sequences into interactive visualizations☆13Jan 20, 2023Updated 3 years ago
- ☆63Sep 21, 2016Updated 9 years ago
- Read, write and format Excel files using R☆15Sep 29, 2025Updated 5 months ago
- ☆14May 12, 2023Updated 2 years ago
- Structural variant pipeline☆18Jun 25, 2020Updated 5 years ago
- An R package for detecting Gene-by-Environment (GxE) interaction effects on the transcriptome using Allele Specific Expression quantified…☆22Oct 27, 2021Updated 4 years ago
- Biopet docs☆17Aug 2, 2018Updated 7 years ago
- GenomeFlow: A Graphical Tool for Modeling and Analyzing 3D Genome Structure☆23Feb 21, 2019Updated 7 years ago
- Code for classifying unstructured text to tissue ontology terms using natural language processing and machine learning.☆27Aug 21, 2024Updated last year
- ☆40Sep 14, 2016Updated 9 years ago
- Proof of concept to use ansible + Lmod to deploy a bioinformatics server☆24Jun 5, 2025Updated 8 months ago
- Toolkit for VNTR genotyping and repeat-pan genome graph construction☆31Aug 18, 2025Updated 6 months ago
- Fast in-silico normalization algorithm for NGS data☆23Nov 1, 2021Updated 4 years ago
- Toolbox package for organizing and working with TCGA data☆28Dec 11, 2025Updated 2 months ago
- recompute GFA link overlaps☆25Sep 14, 2022Updated 3 years ago
- Targeted genotyper for complex polymorphic genes☆36Feb 24, 2026Updated last week
- Project Organization and Management for Genomics☆25Feb 24, 2026Updated last week
- NastyBugs: a simple method for extracting antimicrobial resistance information from metagenomes☆22Dec 6, 2018Updated 7 years ago
- a Shiny/R application to view and annotate copy number variations☆28Mar 8, 2023Updated 2 years ago
- R vignettes/pkgdown for elementary statistics for a summer course☆14Jan 9, 2025Updated last year
- wg-blimp: an end-to-end analysis pipeline for whole genome bisulfite sequencing data☆29Jul 31, 2022Updated 3 years ago
- Jupyter notebooks to more effectively leverage computational resources at NCBI.☆30Aug 16, 2017Updated 8 years ago
- A base docker image for your scientific data analysis projects.☆27Oct 18, 2016Updated 9 years ago
- TideHunter: efficient and sensitive tandem repeat detection from noisy long reads using seed-and-chain☆33Jun 17, 2024Updated last year
- CLAMMS is a scalable tool for detecting common and rare copy number variants from whole-exome sequencing data.☆30Feb 20, 2021Updated 5 years ago
- Original materials for the "Introduction to Solving Biological Problems with Python" 2 days course☆10Jun 25, 2018Updated 7 years ago
- A high throughput automated drug discovery pipeline.☆29Mar 16, 2018Updated 7 years ago
- ☆12Oct 29, 2025Updated 4 months ago
- Curated collection of open-source bioinformatics tools☆28Feb 5, 2019Updated 7 years ago