yueqiw / shiny_cell_browserLinks
Shiny browser for single cell RNAseq data
☆12Updated 2 years ago
Alternatives and similar repositories for shiny_cell_browser
Users that are interested in shiny_cell_browser are comparing it to the libraries listed below
Sorting:
- Materials presented at the BiocNYC meet-up☆12Updated 6 years ago
- Sample code for ldsc analyses in UKBB☆31Updated 2 years ago
- iS-CellR: interactive graphical tool for analysis of single-cell RNAseq data☆24Updated 5 years ago
- A Practical (And Opinionated) Guide To Analyzing 450K Data☆35Updated 10 years ago
- Explore the cancer relevance of your gene list☆51Updated 5 months ago
- R/BioC package to estimate the cell composition of whole blood in DNA methylation samples in microarray or sequencing platforms☆19Updated 2 years ago
- 🧭 Navigate single-cell RNA-seq datasets in your web browser.☆29Updated 2 years ago
- A Package For Predicting The Disruptiveness Of Single Nucleotide Polymorphisms On Transcription Factor Binding Sites.☆29Updated last year
- Introduction to single cell RNAseq data analysis and interpretation course work provided by Harvard Informatics Team.☆16Updated 6 years ago
- Workflow for ZINB-WaVE + DESeq2 intergration for single-cell RNA-seq☆31Updated 4 years ago
- R package for RIVER (RNA-Informed Variant Effect on Regulation)☆12Updated 5 years ago
- Isoform-level expression patterns in single-cell RNA-sequencing data☆11Updated 2 years ago
- R-Based API for accessing the MSKCC Cancer Genomics Data Server (CGDS)☆25Updated 4 years ago
- Comprehensive Human Expressed SequenceS☆18Updated last month
- Detecting Aberrant Splicing Events from RNA-sequencing data☆16Updated 8 months ago
- ☆17Updated last year
- iread☆25Updated 4 years ago
- Molecular Signatures Database (MSigDB) in a data frame☆16Updated 6 years ago
- Wrapper R scripts for performing a weighted-gene co-expression network analysis (WGCNA)☆28Updated 10 years ago
- A set of tools for accurate quantitation of single-cell allele-specific expression☆12Updated 2 years ago
- Combined mutation recurrence and functional impact to identify coding and non-coding cancer drivers☆15Updated 6 years ago
- An R Package for Geneset Enrichment Workflows☆76Updated 2 months ago
- Interactive R package to quantify, analyse and visualise alternative splicing☆37Updated this week
- Parse TF motifs from public databases, read into R, and scan using 'rtfbs'.☆23Updated 6 years ago
- Pipeline to call neoantigens from intron retention events derived from RNA-Seq data.☆28Updated 4 years ago
- AnaLysis routines for ePigenomicS data - 🏫 Bioconductor project☆16Updated 2 years ago
- ☆12Updated last year
- Machine learning use cases for teaching☆13Updated 8 years ago
- Differential ATAC-seq toolkit☆27Updated last year
- Provides Quality Control of sequencing samples by deducing if there is batch effect and adjusts for it.☆35Updated last year