Alternatives and similar repositories for aletolia.github.io

Users that are interested in aletolia.github.io are comparing it to the libraries listed below

• ma-jq / B
  ☆30Updated last year
• Chuxj / CRC-atlas
  ☆33Updated last year
• yuyang3 / pan-B
  These are scripts for pan-cacner B cells analyses.
  ☆58Updated last year
• Lan-lab / sc-GC
  ☆32Updated 3 years ago
• Yelab2020 / Cottrazm
  Construct Tumor Transition Zone Microenvironment
  ☆53Updated 7 months ago
• TangFei965 / pan-NK
  These are scripts for pan-cacner NK cells analyses.
  ☆76Updated 2 years ago
• bio-Pixel / panVC
  ☆57Updated last year
• hedyBao / HNSCC_scRNA
  ☆40Updated last year
• tanlabcode / spatial-bonemarrow-atlas
  This repository contains the code used to generate figures and perform analysis for the manuscript titled "Transcriptomic and Spatial Pro…
  ☆88Updated last year
• PansccSpat / SpatialMapESCC
  ☆24Updated last year
• Sanofi-Public / enact-pipeline
  Repository for ENACT pipeline for end-to-end analysis of Visium HD data
  ☆74Updated 7 months ago
• strangephone / EENT-ONB
  scRNA-seq analysis of EENT-ONB
  ☆22Updated 2 years ago
• yqq-chen / CRC_ICB
  ☆34Updated 2 years ago
• lifei176 / Single-cell-atlas-of-sex-differences-and-androgen-effects
  ☆17Updated last year
• Junjie-Hu / NSCLC-immunotherapy
  ☆28Updated 2 years ago
• meta-cancer / scPLC
  Codes for the scPLC project
  ☆74Updated 3 years ago
• ChanLab-UTSW / BreastCancer_Integrated
  ☆32Updated 11 months ago
• aliceygao / pan-Fibroblast
  ☆57Updated last year
• jalon9358 / LianLab_CRCLM
  ☆15Updated 2 years ago
• 10XGenomics / HumanColonCancer_VisiumHD
  Associated code to the manuscript "Characterization of immune cell populations in the tumor microenvironment of colorectal cancer using h…
  ☆109Updated 8 months ago
• tiroshlab / 3ca
  Code for reproducing the analysis in Gavish et al. "The transcriptional hallmarks of intra-tumor heterogeneity across a thousand tumors".
  ☆132Updated last year
• lfranzen / spatial-lung-fibrosis
  Repository for all R scripts used for the bioinformatic analyses of the mouse and human 10x Genomics Visium spatially resolved transcript…
  ☆31Updated last year
• youqiongye / CRC_scRNAseq
  ☆49Updated 3 years ago
• Aleksobrad / single-cell-rcc-pipeline
  Data files and code for analysis of single-cell ccRCC data for the manuscript "Tumor-Specific Cell Populations in Clear Cell Renal Carcin…
  ☆53Updated 4 years ago
• genecell / COSG
  Accurate and fast cell marker gene identification with COSG
  ☆54Updated 2 weeks ago
• zhengrongbin / MEBOCOST
  A python-based package and software to predict metabolite mediated cell-cell communications by single-cell RNA-seq data
  ☆78Updated 6 months ago
• marcalva / hcc_sc_2022
  HCC single cell analysis for Alvarez, Benhammou et al.
  ☆17Updated 3 years ago
• axelalmet / flowsig
  Python package to find communication-driven intercellular flows from single-cell RNA-sequencing and spatial transcriptomics data.
  ☆82Updated 9 months ago
• Teichlab / cellhint
  A tool for semi-automatic cell type harmonization and integration
  ☆118Updated 3 months ago
• compbioNJU / scPDAC
  R code used to analyze single cell PDAC data
  ☆41Updated last year