ZW-xjtlu / exomePeak2
Peak calling and differential methylation for MeRIP-Seq
☆28Updated 5 months ago
Alternatives and similar repositories for exomePeak2:
Users that are interested in exomePeak2 are comparing it to the libraries listed below
- Public repository containing research code for the TCGA PanCanAtlas Splicing project☆41Updated 4 years ago
- RNA editing tests☆17Updated 4 years ago
- ROSE: RANK ORDERING OF SUPER-ENHANCERS☆45Updated 7 months ago
- Arabidopsis RNA_-seq downstream analysis shiny app☆30Updated 5 years ago
- Bioinformatics Workflows☆20Updated 4 years ago
- A pipeline to process m6A-seq data and down stream analysis.☆43Updated 4 years ago
- R code for single-cell analysis of intestinal epithelial cells☆22Updated 7 years ago
- Compendium to "A Systematic Evaluation of Single Cell RNA-Seq Analysis Pipelines"☆53Updated 4 years ago
- From RNA-seq raw reads to enriched pathways by DEGs☆33Updated 11 months ago
- reproduce the functional enrichment analysis presented in GTEx paper using clusterProfiler/DOSE☆33Updated 3 years ago
- Estimation of Promoter Activity from RNA-Seq data☆51Updated 3 years ago
- Clone of the Bioconductor repository for the DropletUtils package.☆57Updated 3 months ago
- Code and analysis pipeline for Smart-seq3 (Hagemann-Jensen et al. 2020).☆51Updated 3 years ago
- A bioconductor package with minimalist design for drawing elegant tracks or lollipop plot☆69Updated 2 months ago
- EasyFuse is a pipeline for accurate fusion gene detection from RNA-seq data.☆57Updated 3 months ago
- Repo for Physalia course Analysis of Single Cell RNA-Seq data☆31Updated 5 years ago
- Genomic Identification of Significant Targets in Cancer (GISTIC), version 2☆50Updated 2 years ago
- Detect doublets in single-cell RNA-seq data☆36Updated 5 years ago
- This package computes informative enrichment and quality measures for ChIP-seq/DNase-seq/FAIRE-seq/MNase-seq data. It can also be used to…☆59Updated 4 years ago
- A quickstart tool for AmpliconArchitect. Performs all preliminary steps (alignment, CNV calling, seed interval detection) required prior …☆64Updated 3 weeks ago
- documentation for trackViewer☆29Updated 5 years ago
- Detecting intron retention from RNA-Seq experiments☆55Updated 8 months ago
- SNV calling from single cell sequencing☆94Updated 4 months ago
- An R interface to the MEME Suite☆50Updated 5 months ago
- MAnorm2 for Normalizing and Comparing ChIP-seq Samples☆32Updated 2 years ago
- Scripts to import your FeatureCounts output into DEXSeq☆33Updated 6 years ago
- fork of RSeQC python RNAseq metrics suit of tools☆47Updated 6 years ago
- Create KEGG.db Package☆60Updated 2 years ago
- A modular, containerized pipeline for ATAC-seq data processing☆55Updated last week
- release version☆51Updated 2 years ago