csglab / REMBRANDTS
REMoving Bias from Rna-seq ANalysis of Differential Transcript Stability
☆13Updated last year
Alternatives and similar repositories for REMBRANDTS:
Users that are interested in REMBRANDTS are comparing it to the libraries listed below
- A Package For Predicting The Disruptiveness Of Single Nucleotide Polymorphisms On Transcription Factor Binding Sites.☆28Updated 8 months ago
- HOT regions paper☆11Updated 5 years ago
- Predicting TF sequence-specificity similarity with weighted alignments☆13Updated 5 years ago
- Shape Changes In Selecting Sample Outliers in RNA-seq☆11Updated 2 years ago
- Scripts and software supplement for "Gene-level differential analysis at transcript-level resolution" by Yi, Pimentel, Bray and Pachter☆19Updated 7 years ago
- Workflow for ZINB-WaVE + DESeq2 intergration for single-cell RNA-seq☆31Updated 4 years ago
- uORF-Tools are a workflow and a collection of tools for the analysis of 'Upstream Open Reading Frames' (short uORFs)☆13Updated 5 years ago
- Transcriptome-wide network☆16Updated 5 years ago
- ☆21Updated 10 months ago
- Combined mutation recurrence and functional impact to identify coding and non-coding cancer drivers☆15Updated 6 years ago
- Allele-Specific Expression by Single-Cell RNA Sequencing☆28Updated 4 years ago
- a set of NGS pipelines☆24Updated last week
- R package for haplotype phasing using single-cell RNA-seq data☆13Updated 7 years ago
- Useful tools for working with Salmon output☆37Updated 4 years ago
- Expectation-Maximization algorithm for Allele-Specific Expression☆21Updated last year
- Sashimi plots for RNA-seq data using detected transcripts☆27Updated 2 weeks ago
- ☆23Updated 3 years ago
- Pipeline to call neoantigens from intron retention events derived from RNA-Seq data.☆28Updated 4 years ago
- A flexible framework to annotate and prioritize cancer somatic mutations.☆8Updated 7 years ago
- AnaLysis routines for ePigenomicS data - 🏫 Bioconductor project☆16Updated last year
- Smooth-quantile Normalization Adaptation for Inference of co-expression Links☆16Updated last year
- R package: TopDom - An efficient and Deterministic Method for identifying Topological Domains in Genomes☆21Updated last year
- ☆16Updated this week
- R package enabling statistical association analysis and using immunogenetic data transformation functions for HLA amino acid fine mapping…☆12Updated last year
- ☆17Updated 10 months ago
- Readme☆10Updated 5 years ago
- 🧬 🦀 A fast and efficient tool to perform a genome wide Single cell Chromatin State Analysis using multimodal histone modification data.…☆27Updated 3 years ago
- TIMEOR: Trajectory Inference and Mechanism Exploration with Omics Data in R☆16Updated 3 years ago
- SCASA: Single cell transcript quantification tool☆20Updated last year
- Single-cell RNA Processing Software☆11Updated 5 months ago