al-mcintyre / merip_reanalysis_scriptsLinks
Scripts for paper entitled "Limits in the detection of m6A changes using MeRIP/m6A-seq
☆51Updated 5 years ago
Alternatives and similar repositories for merip_reanalysis_scripts
Users that are interested in merip_reanalysis_scripts are comparing it to the libraries listed below
Sorting:
- A pipeline to process m6A-seq data and down stream analysis.☆45Updated 5 years ago
- Integrative pathway enrichment analysis of multivariate omics data☆113Updated 3 weeks ago
- Create KEGG.db Package☆61Updated 2 years ago
- An elegant package to visualize gene structures☆79Updated 2 years ago
- Transcriptomics Visualization R package.☆73Updated 3 months ago
- R data package for pre-compiled somatic mutations from TCGA cohorts and CCLE☆95Updated 10 months ago
- ☆45Updated 4 years ago
- Multiscale embedded gene co-expression network analysis☆54Updated last year
- ☆86Updated last year
- From RNA-seq raw reads to enriched pathways by DEGs☆32Updated last year
- A step-by-step tutorial for Weighted correlation network analysis (WGCNA)☆70Updated 3 years ago
- ☆70Updated 2 years ago
- The goal of `ggVolcano` is to help users make a beautiful volcano map more easily, including general volcano plot(`ggvolcano`), gradient …☆89Updated 2 years ago
- Basic workflow for ATAC-seq analysis☆82Updated last year
- Public repository containing research code for the TCGA PanCanAtlas Splicing project☆41Updated 4 years ago
- Comprehensive tutorial for differential methylation analysis, differential variability analysis and integrative analysis☆28Updated last year
- ☆72Updated 3 years ago
- ☆32Updated 3 years ago
- ATAC-seq snakemake pipeline☆89Updated 5 years ago
- ☆84Updated 11 months ago
- Integrating Ribo-SEQ Upstream and Downstream Analysis☆11Updated 9 months ago
- Tutorial Website☆59Updated 4 years ago
- Install GISTIC2 by one line code; GISTIC2 docker image☆42Updated 2 years ago
- Bayesian network plot for the enrichment analysis results☆64Updated 10 months ago
- ROSE: RANK ORDERING OF SUPER-ENHANCERS☆50Updated last year
- A computational workflow for exitron splicing identification☆12Updated 11 months ago
- GDCRNATools: an R/Bioconductor package for integrative analysis of lncRNA, miRNA and mRNA data in GDC☆66Updated last year
- Links to ATAC-seq analysis tools☆68Updated 3 years ago
- Analysis pipeline for ATAC-seq Data☆61Updated 3 years ago
- ☆62Updated last year