Alternatives and similar repositories for merip_reanalysis_scripts:

Users that are interested in merip_reanalysis_scripts are comparing it to the libraries listed below

• scottzijiezhang / m6A-seq_analysis_workflow
  A pipeline to process m6A-seq data and down stream analysis.
  ☆43Updated 4 years ago
• Lindseynicer / WGCNA_tutorial
  A step-by-step tutorial for Weighted correlation network analysis (WGCNA)
  ☆65Updated 2 years ago
• YuLab-SMU / createKEGGdb
  Create KEGG.db Package
  ☆60Updated 2 years ago
• xryanglab / RiboCode
  release version
  ☆51Updated 2 years ago
• junjunlab / transPlotR
  An elegant package to visualize gene structures
  ☆73Updated last year
• hamidghaedi / Enrichment-Analysis
  From RNA-seq raw reads to enriched pathways by DEGs
  ☆32Updated 10 months ago
• 3UTR / DaPars2
  Dynamics analysis of Alternative PolyAdenylation from RNA-seq
  ☆57Updated last year
• reimandlab / ActivePathways
  Integrative pathway enrichment analysis of multivariate omics data
  ☆107Updated 7 months ago
• benben-miao / TOmicsVis
  Transcriptomics Visualization R package.
  ☆70Updated last year
• xuzhougeng / R-ChIP-data-analysis
  ☆51Updated 6 years ago
• IzarLab / CUIMC-NYP_COVID_autopsy_lung
  ☆42Updated 3 years ago
• AAlhendi1707 / countToFPKM
  Convert Counts to Fragments per Kilobase of Transcript per Million (FPKM)
  ☆62Updated 3 years ago
• xuzhougeng / RNA-seq-downstream-analysis
  Arabidopsis RNA_-seq downstream analysis shiny app
  ☆31Updated 5 years ago
• CebolaLab / ATAC-seq
  Analysis pipeline for ATAC-seq data
  ☆48Updated last year
• yezhengSTAT / CUTTag_tutorial
  Tutorial Website
  ☆57Updated 4 years ago
• PoisonAlien / TCGAmutations
  R data package for pre-compiled somatic mutations from TCGA cohorts and CCLE
  ☆91Updated 5 months ago
• ratschlab / pancanatlas_code_public
  Public repository containing research code for the TCGA PanCanAtlas Splicing project
  ☆41Updated 4 years ago
• OlgaVT / Alternative-Splicing-Tools
  A list of alternative splicing analysis resources
  ☆43Updated 4 months ago
• ShixiangWang / install_GISTIC
  Install GISTIC2 by one line code; GISTIC2 docker image
  ☆41Updated last year
• reskejak / ATAC-seq
  Basic workflow for ATAC-seq analysis
  ☆75Updated last year
• QuKunLab / ATAC-pipe
  Analysis pipeline for ATAC-seq Data
  ☆60Updated 3 years ago
• BioSenior / ggVolcano
  The goal of `ggVolcano` is to help users make a beautiful volcano map more easily, including general volcano plot(`ggvolcano`), gradient …
  ☆80Updated last year
• hamidghaedi / Methylation_Analysis
  Comprehensive tutorial for differential methylation analysis, differential variability analysis and integrative analysis
  ☆24Updated 10 months ago
• FredHutch / Galeano-Nino-Bullman-Intratumoral-Microbiota_2022
  Analysis code used in Galeano Nino et al., Impact of Intratumoral Microbiota on Spatial and Cellular Heterogeneity in human cancer. 2022
  ☆37Updated last year
• jianhong / trackViewer
  A bioconductor package with minimalist design for drawing elegant tracks or lollipop plot
  ☆69Updated 2 months ago
• WubingZhang / MAGeCKFlute
  Integrative analysis pipeline for pooled CRISPR functional genetic screens
  ☆29Updated last year
• ay-lab / ATACProc
  ATAC-seq processing pipeline
  ☆32Updated 2 years ago
• junchaoshi / sports1.1
  Small non-coding RNA annotation Pipeline Optimized for rRNA- and tRNA-Derived Small RNAs
  ☆48Updated 2 months ago
• liulab-dfci / RIMA_pipeline
  ☆78Updated last year
• simonvh / bioinfosummer
  Tutorial for AMSI BioInfoSummer 2018
  ☆29Updated 6 years ago