Alternatives and similar repositories for merip_reanalysis_scripts

Users that are interested in merip_reanalysis_scripts are comparing it to the libraries listed below

• scottzijiezhang / m6A-seq_analysis_workflow
  A pipeline to process m6A-seq data and down stream analysis.
  ☆45Updated 5 years ago
• junjunlab / transPlotR
  An elegant package to visualize gene structures
  ☆82Updated 2 years ago
• YuLab-SMU / createKEGGdb
  Create KEGG.db Package
  ☆61Updated 2 years ago
• PoisonAlien / TCGAmutations
  R data package for pre-compiled somatic mutations from TCGA cohorts and CCLE
  ☆97Updated last year
• benben-miao / TOmicsVis
  Transcriptomics Visualization R package.
  ☆74Updated 5 months ago
• hamidghaedi / Methylation_Analysis
  Comprehensive tutorial for differential methylation analysis, differential variability analysis and integrative analysis
  ☆28Updated last year
• songw01 / MEGENA
  Multiscale embedded gene co-expression network analysis
  ☆55Updated last year
• QuKunLab / ATAC-pipe
  Analysis pipeline for ATAC-seq Data
  ☆62Updated 4 years ago
• Lindseynicer / WGCNA_tutorial
  A step-by-step tutorial for Weighted correlation network analysis (WGCNA)
  ☆71Updated 3 years ago
• reimandlab / ActivePathways
  Integrative pathway enrichment analysis of multivariate omics data
  ☆114Updated 2 months ago
• junjunlab / RiboProfiler
  Integrating Ribo-SEQ Upstream and Downstream Analysis
  ☆11Updated 11 months ago
• BioSenior / ggVolcano
  The goal of `ggVolcano` is to help users make a beautiful volcano map more easily, including general volcano plot(`ggvolcano`), gradient …
  ☆89Updated 2 years ago
• IzarLab / CUIMC-NYP_COVID_autopsy_lung
  ☆45Updated 4 years ago
• yezhengSTAT / CUTTag_tutorial
  Tutorial Website
  ☆59Updated 4 years ago
• crazyhottommy / pyflow-ATACseq
  ATAC-seq snakemake pipeline
  ☆88Updated 5 years ago
• ylab-hi / ScanExitron
  A computational workflow for exitron splicing identification
  ☆12Updated last year
• 3UTR / DaPars2
  Dynamics analysis of Alternative PolyAdenylation from RNA-seq
  ☆62Updated 2 years ago
• ratschlab / pancanatlas_code_public
  Public repository containing research code for the TCGA PanCanAtlas Splicing project
  ☆42Updated 4 years ago
• sjdlabgroup / SAHMI
  ☆84Updated last year
• ying-ge / FigureYa
  ☆222Updated this week
• xryanglab / RiboCode
  release version
  ☆54Updated 3 years ago
• AAlhendi1707 / countToFPKM
  Convert Counts to Fragments per Kilobase of Transcript per Million (FPKM)
  ☆62Updated 4 years ago
• databio / awesome-atac-analysis
  Links to ATAC-seq analysis tools
  ☆70Updated 4 years ago
• reskejak / ATAC-seq
  Basic workflow for ATAC-seq analysis
  ☆86Updated last year
• liulab-dfci / RIMA_pipeline
  ☆86Updated last month
• snakemake-workflows / single-cell-rna-seq
  A single cell RNA-seq workflow, including highly variable gene analysis, cell type assignment and differential expression analysis.
  ☆103Updated 2 years ago
• tavareshugo / tutorial_DESeq2_contrasts
  ☆63Updated last year
• MGI-tech-bioinformatics / DNBelab_C_Series_scRNA-analysis-software
  An open source and flexible pipeline to analyze DNBelab C Series single-cell RNA datasets.
  ☆35Updated 2 years ago
• simonvh / bioinfosummer
  Tutorial for AMSI BioInfoSummer 2018
  ☆30Updated 6 years ago
• ShixiangWang / install_GISTIC
  Install GISTIC2 by one line code; GISTIC2 docker image
  ☆42Updated 2 years ago