al-mcintyre / merip_reanalysis_scriptsLinks
Scripts for paper entitled "Limits in the detection of m6A changes using MeRIP/m6A-seq
☆51Updated 6 years ago
Alternatives and similar repositories for merip_reanalysis_scripts
Users that are interested in merip_reanalysis_scripts are comparing it to the libraries listed below
Sorting:
- A pipeline to process m6A-seq data and down stream analysis.☆44Updated 5 years ago
- An elegant package to visualize gene structures☆83Updated 2 years ago
- R data package for pre-compiled somatic mutations from TCGA cohorts and CCLE☆99Updated last year
- Create KEGG.db Package☆64Updated 2 weeks ago
- Transcriptomics Visualization R package.☆76Updated 9 months ago
- ☆43Updated 4 years ago
- Comprehensive tutorial for differential methylation analysis, differential variability analysis and integrative analysis☆29Updated last year
- A step-by-step tutorial for Weighted correlation network analysis (WGCNA)☆73Updated 3 years ago
- Integrative pathway enrichment analysis of multivariate omics data☆120Updated 7 months ago
- ☆90Updated 5 months ago
- Multiscale embedded gene co-expression network analysis☆57Updated 2 years ago
- From RNA-seq raw reads to enriched pathways by DEGs☆33Updated last year
- Tutorial Website☆63Updated 5 years ago
- 2017_2018 single cell RNA sequencing Workshop UCD_UCB_UCSF☆37Updated 7 years ago
- Basic workflow for ATAC-seq analysis☆92Updated last year
- ☆88Updated last year
- ☆65Updated last year
- ROSE: RANK ORDERING OF SUPER-ENHANCERS☆63Updated 2 months ago
- ATAC-seq snakemake pipeline☆88Updated 5 years ago
- Enrichment Networks for Pathway Enrichment Analysis☆68Updated 2 years ago
- Public repository containing research code for the TCGA PanCanAtlas Splicing project☆42Updated 5 years ago
- Integrating Ribo-SEQ Upstream and Downstream Analysis☆11Updated last year
- Analysis pipeline for ATAC-seq Data☆62Updated 4 years ago
- release version☆58Updated 3 years ago
- ☆51Updated 7 years ago
- Convert Counts to Fragments per Kilobase of Transcript per Million (FPKM)☆63Updated 4 years ago
- A computational workflow for exitron splicing identification☆14Updated last year
- The goal of `ggVolcano` is to help users make a beautiful volcano map more easily, including general volcano plot(`ggvolcano`), gradient …☆93Updated 2 years ago
- Dynamics analysis of Alternative PolyAdenylation from RNA-seq☆63Updated 2 years ago
- ☆87Updated 4 years ago