PickyBinders / PickyBinderLinks
Docking Tool Benchmarking Workflow
☆24Updated last year
Alternatives and similar repositories for PickyBinder
Users that are interested in PickyBinder are comparing it to the libraries listed below
Sorting:
- ☆33Updated last year
- Extension of ThermoMPNN for double mutant predictions☆36Updated 2 weeks ago
- Code for deep learning guided design of dynamic proteins☆30Updated last year
- Enzyme datasets used to benchmark enzyme-substrate promiscuity models☆35Updated 4 years ago
- Exploring the conformational ensembles of protein-protein complexes with transformer-based generative neural networks☆29Updated last year
- ☆40Updated 3 months ago
- Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.☆51Updated last month
- scripts to find PBD structures for cancer driver proteins☆31Updated 4 months ago
- This is the public repository for the RING PyMOL plugin developed by the BioComputing UP laboratory at the University of Padua☆27Updated 5 months ago
- Scores for Hydrophobicity and Charges based on SASAs☆31Updated last month
- Boltzmann-ranked alternative protein conformations from reduced-MSA AlphaFold2☆49Updated last week
- Modelling protein conformational landscape with Alphafold☆51Updated 3 weeks ago
- A benchmark for 3D biomolecular structure prediction models☆59Updated 2 months ago
- Data sharing for High-throughput Prediction of Changes in Protein Conformational Distributions with Subsampled AlphaFold2☆39Updated last year
- Create or modify Rosetta params files (topology files) from scratch, RDKit mols or another params file☆34Updated last year
- ☆19Updated last year
- Implementation of Protein Invariant Point Packer (PIPPack)☆32Updated last year
- ☆38Updated 9 months ago
- Explicit crosslinks in AlphaFold 3☆22Updated 3 months ago
- ☆20Updated 4 months ago
- Controlling the usage of hydrophobic residues on AfDesign for binder peptide design with AlphaFold hallucination protocol☆32Updated last year
- Making Protein folding accessible to all!☆22Updated last year
- DiffDock implementation that adds support for HPC execution using Slurm and Singularity☆26Updated last month
- Code and data used in https://doi.org/10.1101/2021.08.01.454656☆53Updated 3 years ago
- PyPEF – Pythonic Protein Engineering Framework☆24Updated last month
- Bioinformatics and Cheminformatics protocols for peptide analysis☆42Updated 2 years ago
- Code for ApoDock☆20Updated 3 months ago
- Physics-Guided All-Atom Diffusion Model for Accurate Protein-Ligand Complex Prediction☆63Updated 3 months ago
- Physical energy function for protein sequence design☆31Updated 2 years ago
- A Motif Hash Based Method for Matching Crosslinkers into Peptides and Proteins☆20Updated last year