A repository for the Petagraph project
☆14Dec 11, 2025Updated 3 months ago
Alternatives and similar repositories for Petagraph
Users that are interested in Petagraph are comparing it to the libraries listed below
Sorting:
- ☆16Apr 18, 2025Updated 11 months ago
- A curated list of Biomedical Knowledge Graph related learning materials, databases, tools and other resources☆28Nov 4, 2025Updated 4 months ago
- ☆18Nov 7, 2025Updated 4 months ago
- GeneMiner: a tool for extracting phylogenetic markers from next-generation sequencing data☆12Feb 22, 2024Updated 2 years ago
- ☆10Jul 17, 2023Updated 2 years ago
- Nextflow implementation of scAutoQC pipeline☆11Feb 21, 2026Updated last month
- IRI parsing and IRI-URI conversion utilities, aimed at Node.js☆15Aug 31, 2022Updated 3 years ago
- Python Client Package for WikiPathways☆24Updated this week
- code and files for SPARC curation workflows☆17Mar 13, 2026Updated last week
- GeneMiner2 is an enhanced version of our previous developments Easy353 and GeneMiner☆15Updated this week
- A weak supervision framework for (partial) labeling functions☆16Jul 15, 2024Updated last year
- ☆10Mar 7, 2026Updated 2 weeks ago
- ☆24Sep 29, 2025Updated 5 months ago
- An app and library for building, conversion, and validation of GA4GH Phenopackets.☆16Mar 2, 2026Updated 2 weeks ago
- Repository for Apollo-SV ontology. Versioning Apollo-SV independently of the software was made easiest by having it as a separate reposi…☆11Updated this week
- ☆54Apr 16, 2025Updated 11 months ago
- Ontology cross-reference and mapping service☆20Dec 12, 2025Updated 3 months ago
- BioThings API framework - Making high-performance API for biological annotation data☆51Mar 12, 2026Updated last week
- Standardized identifiers and OWL classes for chromosomes and chromosomal parts across species☆15Oct 20, 2025Updated 5 months ago
- Simple Transparent End-To-End Automated Machine Learning Pipeline for Supervised Learning in Tabular Binary Classification Data☆80Mar 14, 2026Updated last week
- Ontology Based Profile Matching☆17May 20, 2022Updated 3 years ago
- The Ontology for Modeling and Representation of Social Entities☆21Mar 6, 2026Updated 2 weeks ago
- Schema for chemistry ontology classes☆21Updated this week
- JSON-LD Contexts for Bioinformatics Data☆23Mar 25, 2024Updated last year
- A simple library to parse out specific elements of a larger JSON object or JSON array based on a provided JSON filter.☆11Jan 6, 2023Updated 3 years ago
- A comprehensive Model Context Protocol (MCP) server that provides access to the AlphaFold Protein Structure Database through a rich set o…☆31Dec 21, 2025Updated 3 months ago
- Python Phenopacket Tools☆16Nov 3, 2025Updated 4 months ago
- renders a KEGGML file and displays a KEGG pathway☆10Jul 14, 2016Updated 9 years ago
- Parallel Recipes : parallel workflow execution made easy☆13Sep 1, 2015Updated 10 years ago
- Simplifying data curation for researchers funded by the NIH SPARC initiative☆30Updated this week
- An R package to query SNPedia☆11Apr 15, 2024Updated last year
- A flexible and modular software suite for domain-based gene neighborhood and protein search, extraction, and clustering.☆28Feb 10, 2026Updated last month
- Harmonizing pathway databases using Biological Expression Language (BEL)☆20Jul 1, 2024Updated last year
- Environment modules for the ILRI, Nairobi HPC cluster☆11Mar 12, 2026Updated last week
- Reproducibility notebooks for scPoli☆23May 5, 2023Updated 2 years ago
- A web interface for Torque Resource Manager☆19Jan 9, 2014Updated 12 years ago
- PyIOmica (pyiomica) is a Python package for omics analyses.☆16Oct 6, 2025Updated 5 months ago
- lightning☆11Oct 20, 2015Updated 10 years ago
- python module for querying the vicc knowledgebase integration datastore☆11Jul 6, 2023Updated 2 years ago