rvolden / C3POa
Computational pipeline for calling consensi on R2C2 nanopore data
☆31Updated 2 years ago
Related projects ⓘ
Alternatives and complementary repositories for C3POa
- Pipeline for de novo clustering of long transcriptomic reads☆26Updated 2 years ago
- ☆46Updated 2 weeks ago
- A python tool box for fast and accurate quality control, conversion and alignment of nanopore sequencing data☆20Updated 2 years ago
- Workflow to prepare high accuracy single molecule consensus sequences from amplicon data using unique molecular identifiers☆29Updated 8 months ago
- for visual evaluation of read support for structural variation☆50Updated 5 months ago
- Master of Pores 2☆23Updated last year
- Reference-free reconstruction and error correction of transcriptomes from Nanopore long-read sequencing☆57Updated 9 months ago
- NANOME pipeline (Nanopore long-read sequencing data consensus DNA methylation detection)☆30Updated 8 months ago
- Tools to annotate genomes using long read transcriptomics data☆45Updated 3 years ago
- Methylation Phasing for Nanopore Sequencing☆44Updated last year
- UCSC Nanopore☆43Updated 5 years ago
- Analysis pipelines from Oxford Nanopore Technologies' Research Division☆50Updated 4 years ago
- An R package for estimating poly(A)-tail lengths in Oxford Nanopore RNA and DNA reads.☆53Updated last month
- vcfdist: Accurately benchmarking phased variant calls☆78Updated this week
- Remove lambda phage reads from a fastq file☆28Updated last year
- Version II of Mandalorion☆32Updated 5 years ago
- deSALT - De Bruijn graph-based Spliced Aligner for Long Transcriptome reads☆44Updated 2 years ago
- Toolkit for calling structural variants using short or long reads☆98Updated this week
- ENCODE long read RNA-seq pipeline☆44Updated last year
- Pipeline for annotating genomes using long read transcriptomics data with pinfish☆27Updated 3 years ago
- EM based transcript abundance from nanopore reads mapped to a transcriptome with minimap2☆56Updated last month
- Lima - Demultiplex Barcoded PacBio Samples☆65Updated 3 weeks ago
- Long-read Isoform Quantification and Analysis☆39Updated 3 months ago
- Simple utility to concatenate .fastq(.gz) files whilst creating a summary of the sequences.☆33Updated 3 months ago
- DNA methylation analysis downstream to Nanopolish for Oxford Nanopore DNA sequencing datasets☆34Updated 3 years ago
- Error correction of ONT transcript reads☆58Updated last year
- ☆24Updated this week
- ☆48Updated 2 months ago
- Snakemake pipelines for nanopore sequencing data archiving and processing☆88Updated 2 years ago
- Genome-wide reconstruction of complex structural variants☆39Updated 2 years ago
- Digenome-toolkit ver2.☆15Updated 3 years ago