rvinas / adversarial-gene-expressionLinks
Adversarial generation of gene expression data using Generative Adversarial Networks
☆29Updated 4 years ago
Alternatives and similar repositories for adversarial-gene-expression
Users that are interested in adversarial-gene-expression are comparing it to the libraries listed below
Sorting:
- CellBox: Interpretable Machine Learning for Perturbation Biology☆56Updated 2 years ago
- Biological Network Integration using Convolutions☆63Updated 2 years ago
- Knowledge-primed neural networks☆38Updated 2 years ago
- Discovering novel cell types across heterogenous single-cell experiments☆123Updated 3 years ago
- MONET : MOdularising NEtwork Toolbox - https://doi.org/10.1093/bioinformatics/btaa236☆48Updated 4 years ago
- Interpretation by Deep Generative Masking for Biological Sequences☆37Updated 4 years ago
- Network-based project to explore gene connectivity through biological scales☆23Updated last year
- Prize-Collecting Steiner Forests for Interactomes☆63Updated last year
- A generative topic model that facilitates integrative analysis of large-scale single-cell RNA sequencing data.☆52Updated 4 years ago
- ☆74Updated last week
- CMap Notebooks for LINCS 2020 Workshop☆49Updated 4 years ago
- ☆19Updated last year
- ☆66Updated 2 years ago
- accurate prediction of promoter activity and variant effects from massive parallel reporter assays☆43Updated 7 months ago
- Standard set of data-loaders for training and making predictions for DNA sequence-based models.☆83Updated last year
- covolutional neural network based coexpression analysis☆79Updated 5 years ago
- A simulator for single-cell expression data guided by gene regulatory networks☆73Updated last year
- ExplaiNN: interpretable and transparent neural networks for genomics☆49Updated 10 months ago
- A collection of scripts and tools for loading, processing, and handling single cell data.☆76Updated 4 months ago
- This repository contains the code for our manuscript - 'The evolution, evolvability, and engineering gene regulatory DNA'☆96Updated 2 years ago
- Fast Gene Set Enrichment Analysis (GSEA) implementation of the prerank algorithm. Use Loess interpolation of bimodal ES distribution for …☆59Updated 8 months ago
- repository containing analysis scripts and auxiliary files☆36Updated 5 years ago
- Hypergraph Factorisation☆26Updated last year
- Data Integration tool utilizing network information for predictive analyses☆16Updated 8 months ago
- Conditional out-of-distribution prediction☆62Updated last year
- using graph convolutional neural network and spaital transcriptomics data to infer cell-cell interactions☆55Updated 4 years ago
- Batch-adversarial variational auto-encoder (BAVARIA) for simultaneous dimensionality reduction and integration of single-cell ATAC-seq da…☆14Updated 2 years ago
- ☆90Updated 2 years ago
- Towards Gene Expression Convolutions using Gene Interaction Graphs☆75Updated 4 years ago
- mygene is an easy-to-use Python wrapper to access MyGene.Info services.☆97Updated last year