RSV-B lineage definitions and proposals
☆10Nov 9, 2025Updated last year
Alternatives and similar repositories for lineage-designation-B
Users that are interested in lineage-designation-B are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- RSV-A lineage definitions and proposals☆16Nov 9, 2025Updated last year
- Read contamination removal☆24Jan 24, 2024Updated 2 years ago
- Systematic ProtEin AnnotatoR☆19Sep 20, 2025Updated last year
- Course materials for the Advanced Courses Working With Pathogen Genomes course run virtually in Asia 10-14 May 2021☆11Jul 5, 2024Updated 2 years ago
- ☆13Updated this week
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Workflow for RSV analyses on Nextstrain.org☆11Nov 2, 2026Updated last week
- Indels are not ideal - quick test for interrupted ORFs in bacterial/microbial genomes☆16Jun 26, 2018Updated 8 years ago
- Repository for storing latest model, protobuf, designation hash and alias files for pangolin assignments☆34Sep 30, 2026Updated last month
- Bacterial surveillance pipeline.☆30Updated this week
- Collection template and associated materials for SARS-CoV-2 metadata☆37Oct 27, 2023Updated 3 years ago
- Programmatically interact with the GISAID database.☆83Aug 5, 2025Updated last year
- Viral (meta)-genome assembly pipeline.☆24Sep 8, 2026Updated 2 months ago
- Python heatmap interface using intuitive grammar of graphics, implemented as an rpy2 wrapper around ComplexHeatmap package.☆10Jul 26, 2023Updated 3 years ago
- Assembly of Nanopore Sequencing☆17Oct 9, 2026Updated last month
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Assembly based core genome SNP alignments for bacteria☆25Oct 23, 2019Updated 7 years ago
- serious constellations of reoccurring phylogenetically-independent origin☆39Feb 13, 2026Updated 8 months ago
- ☆11Jul 13, 2026Updated 3 months ago
- SARS-Cov-2 Recombinant Finder for fasta sequences☆50Jun 22, 2022Updated 4 years ago
- Nextflow pipeline for generation of phylogenetic trees to be visualized in Auspice.☆11Jan 6, 2026Updated 10 months ago
- app to collapse Pango lineages for reporting☆14Oct 2, 2026Updated last month
- pathogen agnostic general workflow for genome assembly of Illumina paired-end sequence data☆13Jan 6, 2026Updated 10 months ago
- SARs-CoV-2 Primer schemes☆16May 14, 2025Updated last year
- Nextstrain build for dengue virus☆19Oct 15, 2026Updated 3 weeks ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Store of the trained model for pangolin to access.☆55Oct 4, 2022Updated 4 years ago
- Workflow for viral analysis guided by reference☆16Updated this week
- ☆51Mar 11, 2022Updated 4 years ago
- Generates Don't-Break-The-Chain calendars☆27Nov 27, 2022Updated 3 years ago
- ☆11Sep 28, 2017Updated 9 years ago
- mytax is a tool for building custom taxonomies, useful for nucleotide sequence classification☆14Oct 9, 2026Updated last month
- Renders SVG schema of SARS-CoV-2 clade as defined by Nextstrain☆18Nov 24, 2025Updated 11 months ago
- ☆23Aug 10, 2026Updated 3 months ago
- Automated evolutionary annotation of existing datasets using Nextflow☆11Jun 15, 2026Updated 4 months ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Official place for proposals and details around monkeypox virus lineage designations☆23Jul 7, 2026Updated 4 months ago
- Repo for PrimerSchemes☆22Oct 27, 2026Updated 2 weeks ago
- An open-source pathogen sequence database dedicated to equitable sharing, transparent governance, & empowering global public health.☆59Updated this week
- Utility to alias and dealias pango lineages☆23Dec 18, 2023Updated 2 years ago
- genome annotation (RNAseq and TE) pipeline (draft)☆14Updated this week
- Collaborative genetic studies of idiopathic pulmonary fibrosis☆25Sep 1, 2026Updated 2 months ago
- The ARTIC fieldbioinformatics pipeline☆136Aug 26, 2026Updated 2 months ago
Are these results useful?