elgw / deconwolfLinks
Deconvolution of widefield microscopy images and generation of point spread functions
☆55Updated this week
Alternatives and similar repositories for deconwolf
Users that are interested in deconwolf are comparing it to the libraries listed below
Sorting:
- EASI-FISH analysis pipeline for spatial transcriptomics☆35Updated last year
- ☆36Updated last year
- Accurate and efficient spot detection for microscopy data☆108Updated last month
- Bringing the ZeroCostDL4Mic experience running everywhere via easy-to-install docker images☆82Updated this week
- ☆89Updated 2 weeks ago
- Development of PICASSO plugin for napari☆16Updated 2 years ago
- Tool for precise, interactive, fast and scalable FISH spot detection☆50Updated 9 months ago
- ☆12Updated last year
- Whole slide image registration through wsireg in napari.☆12Updated 2 years ago
- Wrappers for external software calls (Cellpose, Elastix, Ilastix...) and java utilities (object conversions and display)☆39Updated 3 weeks ago
- Imagej toolset to ease hyperstacks visualization and handling☆23Updated last year
- ASHLAR: Alignment by Simultaneous Harmonization of Layer/Adjacency Registration☆156Updated 3 months ago
- A napari plugin for clustering objects according to their properties.☆88Updated this week
- The 2025 version of cellPLATO☆15Updated last month
- A module with convenience functions for writing Python code that interacts with OMERO.☆45Updated this week
- A platform for compiling, analyzing, and exploring tracking data☆47Updated 3 months ago
- ☆51Updated 6 months ago
- Nanoscopy library for Python (NanoPyx, the successor to NanoJ) - focused on light microscopy and super-resolution imaging☆88Updated last week
- ☆13Updated last month
- Toolbox for the analysis of smFISH images.☆68Updated 2 years ago
- Segmentation method able to detect membrane/nuclei-labelled cells with low signal-to-noise ratio and dense packing in 2D and 3D. Availabl…☆34Updated last month
- Guides and code for 3D nuclear instance segmentation☆22Updated 4 months ago
- ☆16Updated last year
- Image reading, metadata management, and image writing for Microscopy images in Python☆105Updated last month
- Interactive visualization and sharing of cell tracking data in the browser☆40Updated 3 weeks ago
- Python scripts library for Aivia. Ask your questions on the forum >>☆14Updated 3 weeks ago
- A Fiji/ImageJ plugin to generate ROIs from label images, allowing ROI erosion and quantification☆23Updated 4 years ago
- Nellie: Automated organelle segmentation, tracking, and hierarchical feature extraction in 2D/3D live-cell microscopy☆85Updated 7 months ago
- Multiple file format reading directly into napari using pure Python☆39Updated last month
- MSSR Plugin☆14Updated last year