Training scripts for BERTax
☆12Jun 12, 2024Updated 2 years ago
Alternatives and similar repositories for bertax_training
Users that are interested in bertax_training are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Taxonomic classification of DNA sequences☆57Jul 2, 2024Updated 2 years ago
- ☆23Jan 6, 2026Updated 7 months ago
- ☆14Jun 17, 2023Updated 3 years ago
- [AAAI'22] RepBin: Constraint-Based Graph Representation Learning for Metagenomic Binning☆25Jan 26, 2024Updated 2 years ago
- JanusDNA☆32Mar 19, 2026Updated 4 months ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- Repository for codes, analyses and visualizations for the CAMI II challenges☆15Sep 4, 2023Updated 2 years ago
- ☆10Dec 29, 2021Updated 4 years ago
- Variant to disease dataset workflows for Open Targets Genetics☆14May 11, 2026Updated 3 months ago
- Deepurify is a tool to filter the contaminated contigs in a MAG with a language model.☆24Jun 3, 2025Updated last year
- ☆18Oct 7, 2024Updated last year
- Deep learning library for biological sequences. Extension of Fastai and Pytorch.☆39Jul 17, 2026Updated 3 weeks ago
- pretrained LookingGlass language model for biological read-length DNA sequences, and related models derived from transfer learning☆17Feb 19, 2026Updated 5 months ago
- The binning tool with dynamic contrastive learning and deep language model☆25Nov 14, 2025Updated 9 months ago
- Model for taxonomy classification☆16May 28, 2021Updated 5 years ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- ☆18Dec 10, 2022Updated 3 years ago
- Library of models for Protein Function prediction (part of the 18th top solution out of 1625 teams in CAFA5)☆20May 23, 2025Updated last year
- ☆11Jun 11, 2020Updated 6 years ago
- Computing the gap statistics from Tibshirani et. al. for various clustering algorithms☆14Nov 10, 2025Updated 9 months ago
- ☆14Jan 13, 2024Updated 2 years ago
- Unsupervised neural network for learning embeddings of GO terms.☆21Feb 19, 2022Updated 4 years ago
- DistilProtBert implementation, a distilled version of ProtBert model.☆15Sep 21, 2022Updated 3 years ago
- How to use SHAP values for better cluster analysis☆60May 15, 2022Updated 4 years ago
- ☆12Jun 3, 2025Updated last year
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Compare microbial co-occurrence networks based on the trans_network class of microeco package☆12Mar 25, 2026Updated 4 months ago
- complex Chaos Game Representation for DNA sequences☆21Apr 3, 2025Updated last year
- Python3 wrapper for parallelized gene prediction using Prodigal☆11Mar 3, 2023Updated 3 years ago
- SemiBin: metagenomics binning with self-supervised deep learning☆174Aug 3, 2026Updated last week
- ☆25Oct 26, 2021Updated 4 years ago
- A multidimensional scaling (MDS) and landmark multidimensional scaling (LMDS) implementation☆17Apr 10, 2021Updated 5 years ago
- Optimal TSP in Polynomial Time☆15May 30, 2025Updated last year
- ccPCA: contrasting clusters in PCA.☆22May 27, 2025Updated last year
- Data, results, and code accompanying the manuscript: "Supervised learning is an accurate method for network-based gene classification"☆10Nov 3, 2021Updated 4 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Generative Adversarial Network with Hinge Loss☆16Feb 1, 2020Updated 6 years ago
- Python package for common tasks in bioinformatic.☆12Sep 24, 2025Updated 10 months ago
- Reference-free quality assessment for Hi-C sequencing data☆13Apr 30, 2024Updated 2 years ago
- [ISMB 2025] DNABERT_S: Learning Species-Aware DNA Embedding with Genome Foundation Models☆130Jan 1, 2026Updated 7 months ago
- ☆14Apr 7, 2022Updated 4 years ago
- 本例程提供了C++的STL常用数据结构及其算法的使用范例,比如vector、string、list、forward_list、deque、queue、stack、map、set、multimap、multiset、tuple、bitset的使用范例,以及algorithm常…☆29Jul 14, 2018Updated 8 years ago
- More scalable dereplication for metagenome assembled genomes☆87Aug 3, 2026Updated last week