tristanic / pae_to_domains

Related projects ⓘ

Alternatives and complementary repositories for pae_to_domains

• psipred / s4pred
  A tool for accurate prediction of a protein's secondary structure from only it's amino acid sequence
  ☆48Updated 4 months ago
• CongLabCode / DPAM
  A domain parser for Alphafold models
  ☆32Updated 11 months ago
• Faezov / PDBrenum
  ☆27Updated 6 months ago
• proteinphysiologylab / frustratometeR
  ☆33Updated last month
• wells-wood-research / PDBench
  PDBench is a dataset and software package for evaluating fixed-backbone sequence design algorithms.
  ☆27Updated last year
• kWeissenow / EMBER3D
  Ultra-fast in-silico structure mutation
  ☆32Updated last year
• KULL-Centre / _2022_ML-ddG-Blaabjerg
  ☆46Updated 5 months ago
• sokrypton / map_align
  Contact map alignment
  ☆39Updated 3 years ago
• dina-lab3D / CombFold
  ☆74Updated 2 months ago
• Rappsilber-Laboratory / AlphaLink2
  AlphaLink2: Integrating crosslinking MS data into Uni-Fold-Multimer
  ☆48Updated 3 months ago
• lcbc-epfl / metal-site-prediction
  ☆35Updated 10 months ago
• SNU-CSSB / RF2-Lite
  ☆21Updated 5 months ago
• patrickbryant1 / SpeedPPI
  Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning
  ☆78Updated 8 months ago
• RosettaCommons / Rosetta-DL
  A bundle of deep-learning packages for biomolecular structure prediction and design contributed to the Rosetta Commons
  ☆32Updated 2 years ago
• labstructbioinf / localpdb
  Python package to manage protein structures and their annotations
  ☆40Updated 9 months ago
• data2code / afpdb
  Efficient manipulation of protein structures in Python
  ☆41Updated 2 weeks ago
• Furman-Lab / Peptide_docking_with_AF2_and_RosettAfold
  Code and data used in https://doi.org/10.1101/2021.08.01.454656
  ☆51Updated 2 years ago
• ranganathanlab / bmDCA
  Fork of matteofigliuzzi/bmDCA repository for Boltzmann-machine Direct Coupling Analysis (bmDCA).
  ☆34Updated 4 years ago
• Rocklin-Lab / cdna-display-proteolysis-pipeline
  ☆21Updated last year
• PDBeurope / pdbe-api-training
  Interactive Python notebooks for PDBe API training
  ☆45Updated last week
• fhalab / evSeq
  Computational tools for extremely low-cost, massively parallel amplicon-based sequencing of every variant in protein mutant libraries.
  ☆30Updated 2 years ago
• MPI-Dortmund / pymissense
  PyMissense creates the pathogenicity plot and modified pdb as shown in the AlphaMissense paper for custom proteins.
  ☆22Updated last year
• JudeWells / chainsaw
  ☆29Updated last month
• ELELAB / mutatex
  scripts and facilities for in-silico mutagenesis with FoldX
  ☆51Updated this week
• Graylab / deepH3-distances-orientations
  ☆34Updated 3 years ago
• silicogenesis / protkit
  A Unified Approach to Protein Engineering
  ☆39Updated 4 months ago
• oxpig / AbLang2
  An antibody-specific language model focusing on NGL prediction
  ☆21Updated 3 months ago
• seanrjohnson / protein_scoring
  Generating and scoring novel enzyme sequences with a variety of models and metrics
  ☆62Updated 4 months ago
• JoaoRodrigues / interfacea
  An open-source library for the analysis of protein interactions.
  ☆29Updated 2 years ago
• rochoa85 / PepFun
  Bioinformatics and Cheminformatics protocols for peptide analysis
  ☆36Updated last year