tristanic / pae_to_domainsLinks
Graph-based community clustering approach to extract protein domains from a predicted aligned error matrix
☆35Updated 3 years ago
Alternatives and similar repositories for pae_to_domains
Users that are interested in pae_to_domains are comparing it to the libraries listed below
Sorting:
- ☆36Updated 2 months ago
- A tool for accurate prediction of a protein's secondary structure from only it's amino acid sequence☆58Updated 4 months ago
- ☆30Updated 3 months ago
- Python package to manage protein structures and their annotations☆43Updated last year
- ☆85Updated last year
- Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning☆91Updated last year
- Contact map alignment☆41Updated 4 years ago
- AlphaLink2: Integrating crosslinking MS data into Uni-Fold-Multimer☆57Updated 3 months ago
- ☆51Updated 2 weeks ago
- scripts and facilities for in-silico mutagenesis with FoldX☆59Updated last month
- Fast and accurate protein structure prediction☆54Updated 7 months ago
- Fork of matteofigliuzzi/bmDCA repository for Boltzmann-machine Direct Coupling Analysis (bmDCA).☆35Updated 5 years ago
- The DSSP building software☆47Updated 2 years ago
- Graph Network for protein-protein interface including language model features☆32Updated last year
- Kuhlman Lab Installation of AlphaFold3☆30Updated 3 months ago
- PyMissense creates the pathogenicity plot and modified pdb as shown in the AlphaMissense paper for custom proteins.☆23Updated last year
- ☆40Updated 3 years ago
- Ultra-fast in-silico structure mutation☆34Updated 4 months ago
- Fragment binding prediction with ColabFold☆36Updated 5 months ago
- AlphaLink: Integrating crosslinking MS data into OpenFold☆68Updated last year
- GTalign, high-performance protein structure alignment, superposition and search☆49Updated last week
- Code, intermediate results and an interactive visualisation on prediction of putative novel enzymes and small molecule binding proteins p…☆26Updated 2 years ago
- ☆25Updated 2 years ago
- Interactive Python notebooks for PDBe API training☆55Updated 2 months ago
- ☆85Updated 11 months ago
- Neural networks to fit interpretable models and quantify energies, energetic couplings, epistasis, and allostery from deep mutational sca…☆53Updated 4 months ago
- Parametric Building of de novo Functional Topologies☆44Updated 3 years ago
- ☆30Updated last year
- Computational tools for extremely low-cost, massively parallel amplicon-based sequencing of every variant in protein mutant libraries.☆34Updated 3 years ago
- ColabFold protocol☆52Updated 10 months ago