yotamfr / prot2vec
protein embedding project
☆12Updated 6 years ago
Alternatives and similar repositories for prot2vec:
Users that are interested in prot2vec are comparing it to the libraries listed below
- ☆11Updated 6 years ago
- A mini-framework to build and train neural networks for molecular biology.☆10Updated 7 years ago
- OCEAN - Optimized Cross rEActivity estimatioN☆11Updated 4 years ago
- mGPfusion is a Gaussian process based method for predicting stability changes upon single and multiple mutations of proteins that comple…☆15Updated 6 years ago
- Modeling and Bayesian analysis of fluorescence and absorbance assays.☆18Updated 3 years ago
- A novel approach to pose selection in protein-ligand docking based on graph theory.☆19Updated 8 years ago
- Web cards/apps describing peptides☆28Updated last year
- PCA and normal mode analysis of proteins☆17Updated 10 months ago
- screenlamp is a Python toolkit for hypothesis-driven virtual screening☆22Updated 7 years ago
- Virtual machine with all software and sample data to run 3D-e-Chem Knime workflows☆16Updated 6 years ago
- ProFET: Protein Feature Engineering Toolkit for Machine Learning☆57Updated 9 years ago
- Conda build recipe for the rdkit☆51Updated 3 years ago
- ☆25Updated 2 years ago
- ☆21Updated 4 years ago
- Template with code & dataset for the "Structural basis for solubility in protein expression systems" challenge at the Copenhagen Bioinfor…☆22Updated 3 years ago
- Amino Acid Embedding Representation as Machine Learning Features☆19Updated 6 years ago
- Code used in the manuscript for De Novo Design of Bioactive Protein Switches☆16Updated 5 years ago
- Deep convolutional networks for fold recognition☆22Updated 5 years ago
- ☆17Updated last month
- fragbuilder is a tool to create, setup and analyze QM calculations on peptides.☆14Updated 10 years ago
- The python implementation of the MMTF API, decoder and encoder.☆46Updated 2 years ago
- Ligand-based Virtual Screening using Deep Learning☆16Updated last week
- Amino-Acid Sequence Annotation Predictor (ASAP)☆25Updated 4 years ago
- ☆12Updated 10 years ago
- DeepChem 2017: Deep Learning & NLP for Computational Chemistry, Biology & Nano-materials☆23Updated 7 years ago
- Deep learning based alignment-free method for protein family modeling and prediction☆16Updated 6 years ago
- Protein-protein, protein-peptide and protein-DNA docking framework based on the GSO algorithm☆24Updated 5 years ago
- An experimental package for deep learning for molecular docking☆20Updated 5 years ago
- ☆28Updated 11 months ago
- Learning Protein Constitutive Motifs from Sequence Data: RBM toolbox☆20Updated 6 years ago