richardmleggett / NanoOKView external linksLinks
Analysis tool for Nanopore sequencing data
☆11Apr 26, 2024Updated last year
Alternatives and similar repositories for NanoOK
Users that are interested in NanoOK are comparing it to the libraries listed below
Sorting:
- Analysis tool for Nanopore sequencing data☆34Apr 15, 2019Updated 6 years ago
- ☆29Sep 28, 2021Updated 4 years ago
- Test data for MultiQC.☆24Dec 21, 2025Updated last month
- Some simple scripts to ease management and local basecalling of millions of FAST5 files☆25Nov 25, 2017Updated 8 years ago
- highthroughput rRNA sequence classification and OTU mapping for metagenomic samples☆25Nov 3, 2023Updated 2 years ago
- convert PAF format to CHAIN format☆34May 14, 2025Updated 9 months ago
- Lint Nextflow pipelines in Python.☆11Jan 23, 2025Updated last year
- ☆14Mar 22, 2018Updated 7 years ago
- Phasing of dikaryotic fungal genome assemblies☆13Mar 1, 2023Updated 2 years ago
- Detects and blacklists paralog RAD loci analyzed in Stacks or ipyrad, based on the McKinney 2017 method (doi:10.1111/1755-0998.12613)☆10Sep 4, 2019Updated 6 years ago
- A flexible and fast sgRNA counter from FASTQ Files☆11Dec 29, 2025Updated last month
- Scotch pipeline for indel calling.☆10Nov 25, 2019Updated 6 years ago
- lncRNA-Py is a development package for applying machine learning and deep learning to the problem of lncRNA classification, i.e. predicti…☆12Jan 24, 2025Updated last year
- ☆16Jan 14, 2026Updated last month
- your friendly pangenome graph genotyper☆10Feb 6, 2023Updated 3 years ago
- Msuite2: integrated DNA methylation data analysis toolkit with enhanced performance☆10Jan 21, 2025Updated last year
- For when you just need a coverage plot.☆11Mar 26, 2021Updated 4 years ago
- FASTAptamer: A Bioinformatic Toolkit for High-Throughput Sequence Analysis of Combinatorial Selections☆10Oct 7, 2024Updated last year
- Translocator: local realignment and global remapping enabling accurate translocation detection using single-molecule sequencing long read…☆12Jan 22, 2020Updated 6 years ago
- Python scripts for Exploratory Data Analysis of Pacific Biosciences sequence data☆18Aug 13, 2014Updated 11 years ago
- PanEffect is a JavaScript framework to explore variant effects across a pangenome. The tool has two views that allows a user to (1) expl…☆13Jan 30, 2024Updated 2 years ago
- ☆10Feb 21, 2020Updated 5 years ago
- ☆11Nov 17, 2020Updated 5 years ago
- RTOS based on L4 microkernel.☆17Sep 18, 2018Updated 7 years ago
- [Archived] SnakeMake pipeline to run BlobTools on public assemblies☆11Jul 3, 2023Updated 2 years ago
- NEFF Calculator and MSA File Converter☆13Sep 16, 2025Updated 5 months ago
- Dual barcode and primer demultiplexing for MinION sequenced reads☆41Jan 19, 2023Updated 3 years ago
- deepBreaks , a computational method, aims to identify important changes in association with the phenotype of interest using multi-alignme…☆12Oct 22, 2025Updated 3 months ago
- Data for paper "Random Access in Large-Scale DNA Data Storage"☆13Jan 11, 2018Updated 8 years ago
- ☆13Updated this week
- My Interview recording repo.☆11Mar 22, 2023Updated 2 years ago
- Feature Aggregate Depth Utility☆12Aug 20, 2024Updated last year
- An automated post sequencing data processing pipeline for Illumina HiSeq☆14Aug 28, 2025Updated 5 months ago
- Scaffolding of genomic assemblies with RNA seq data☆15Oct 8, 2015Updated 10 years ago
- Analysis of sequencing error profile for long read data.☆13Mar 30, 2023Updated 2 years ago
- An R package to perform systematic quality checks on comparative genomics analyses☆12Jan 12, 2024Updated 2 years ago
- ☆11May 6, 2021Updated 4 years ago
- ☆10Feb 20, 2024Updated last year
- Quality control plotting for long reads☆10May 14, 2024Updated last year